Non-Coding RNA Search

reje13b_a11.y1

Sequence:


               
               GGAGCATCCAATTTGGACTTAATCCGATGACTTGACGCCAAAACATCTGCCCACATGTGC
TGAAGATCTGTGCAGAGAATGAAAACCTTGATTACCTTGCGAACTTCACTTCTGCAACAG
GAAGTTAAAAACTTGAAATTTATATTGAAATGGATTTATATGTCTTCTTTCTGTCAAATA
CACCTTCACATCTGAATGTGAGAGTCTGATGTGAACATTCATCAAAGAATAAATTTACTT
CCAATGTGCAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGCATCCAATTTGGACTTAATCCGATGACTTGACGCCAAAACATCTGCCCACATGTGC
TGAAGATCTGTGCAGAGAATGAAAACCTTGATTACCTTGCGAACTTCACTTCTGCAACAG
GAAGTTAAAAACTTGAAATTTATATTGAAATGGATTTATATGTCTTCTTTCTGTCAAATA
CACCTTCACATCTGAATGTGAGAGTCTGATGTGAACATTCATCAAAGAATAAATTTACTT
CCAATGTGCAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               33-246, gnl|bosTau2|chr1 (56973440-56973227)
               

               
               33-246, gnl|canFam2|chr34 (45058597-45058946)
               

               
               33-246, gnl|dasNov1|scaffold_5518 (38243-38598)
               

               
               33-246, gnl|echTel1|scaffold_178595 (4357-3997)
               

               
               33-246, gnl|hg17|chr3 (180144068-180144416)
               

               
               33-246, gnl|Hg17|chr3 (180144327-180144114)
               

               
               33-246, gnl|loxAfr1|scaffold_6145 (35301-35657)
               

               
               33-246, gnl|oryCun1|scaffold_125275 (8723-9061)
               

               
               33-246, gnl|panTro1|chr2 (183908615-183908965)
               

               
               33-246, gnl|rheMac2|chr2 (107873765-107873416)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-246, gnl|bosTau2|chr1 (56973440-56973227)
               

               
               33-246, gnl|canFam2|chr34 (45058597-45058946)
               

               
               33-246, gnl|dasNov1|scaffold_5518 (38243-38598)
               

               
               33-246, gnl|echTel1|scaffold_178595 (4357-3997)
               

               
               33-246, gnl|hg17|chr3 (180144068-180144416)
               

               
               33-246, gnl|Hg17|chr3 (180144327-180144114)
               

               
               33-246, gnl|loxAfr1|scaffold_6145 (35301-35657)
               

               
               33-246, gnl|oryCun1|scaffold_125275 (8723-9061)
               

               
               33-246, gnl|panTro1|chr2 (183908615-183908965)
               

               
               33-246, gnl|rheMac2|chr2 (107873765-107873416)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	33-246, gnl\|bosTau2\|chr1 (56973440-56973227)
	33-246, gnl\|canFam2\|chr34 (45058597-45058946)
	33-246, gnl\|dasNov1\|scaffold_5518 (38243-38598)
	33-246, gnl\|echTel1\|scaffold_178595 (4357-3997)
	33-246, gnl\|hg17\|chr3 (180144068-180144416)
	33-246, gnl\|Hg17\|chr3 (180144327-180144114)
	33-246, gnl\|loxAfr1\|scaffold_6145 (35301-35657)
	33-246, gnl\|oryCun1\|scaffold_125275 (8723-9061)
	33-246, gnl\|panTro1\|chr2 (183908615-183908965)
	33-246, gnl\|rheMac2\|chr2 (107873765-107873416)