Non-Coding RNA Search

reje18b_i6.y1

Sequence:


               
               TTCAAAACTCGTAGCGATGAAGCTCTTTCTGAAGAATTATTGCAGGACTTAAAAAAAATG
CAACTGGAACAACCTTCAGCATTAGAAGAAAGCCAGAAGGATATGTCTTATACCCAGTCA
GACTCCTTTAAACCTCTCACATATGACCTAGAAGATGATAATTCTGAGAATAATGACTTC
AGTACTCTTAGTGGAATGCTAAGATATATAAACAAAGAAGTGAGACTATTAAAAAAGTCT
TCTATGCAAACAGGTGCTGGTTCAACTCAGGGAGAAAATTTATAATTAAAAGAAGATGTT
GATGTGATGAAAAATGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCAAAACTCGTAGCGATGAAGCTCTTTCTGAAGAATTATTGCAGGACTTAAAAAAAATG
CAACTGGAACAACCTTCAGCATTAGAAGAAAGCCAGAAGGATATGTCTTATACCCAGTCA
GACTCCTTTAAACCTCTCACATATGACCTAGAAGATGATAATTCTGAGAATAATGACTTC
AGTACTCTTAGTGGAATGCTAAGATATATAAACAAAGAAGTGAGACTATTAAAAAAGTCT
TCTATGCAAACAGGTGCTGGTTCAACTCAGGGAGAAAATTTATAATTAAAAGAAGATGTT
GATGTGATGAAAAATGGAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61852138|ref|XP_609418.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61852138|ref|XP_609418.1|

Aligned organism(s): 13 entry(ies)

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Aligned organism(s): 13 entry(ies)

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               1-292, gnl|bosTau2|chr3 (45872873-45873165)
               

               
               1-292, gnl|canFam2|chr6 (58885097-58884581)
               

               
               1-292, gnl|echTel1|scaffold_163046 (10005-9511)
               

               
               1-292, gnl|hg17|chr1 (93447914-93448430)
               

               
               1-292, gnl|Hg17|chr1 (93448123-93448415)
               

               
               1-292, gnl|loxAfr1|scaffold_141375 (4548-4044)
               

               
               1-292, gnl|mm7|chr5 (107409493-107410012)
               

               
               1-292, gnl|Mm7|chr5 (107409705-107409997)
               

               
               1-292, gnl|monDom2|scaffold_0 (27935798-27935274)
               

               
               1-292, gnl|oryCun1|scaffold_151864 (878-359)
               

               
               1-292, gnl|panTro1|chr1 (92430430-92430946)
               

               
               1-292, gnl|rheMac2|chr1 (96287687-96288202)
               

               
               1-292, gnl|rn3|chr14 (2053284-2052768)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-292, gnl|bosTau2|chr3 (45872873-45873165)
               

               
               1-292, gnl|canFam2|chr6 (58885097-58884581)
               

               
               1-292, gnl|echTel1|scaffold_163046 (10005-9511)
               

               
               1-292, gnl|hg17|chr1 (93447914-93448430)
               

               
               1-292, gnl|Hg17|chr1 (93448123-93448415)
               

               
               1-292, gnl|loxAfr1|scaffold_141375 (4548-4044)
               

               
               1-292, gnl|mm7|chr5 (107409493-107410012)
               

               
               1-292, gnl|Mm7|chr5 (107409705-107409997)
               

               
               1-292, gnl|monDom2|scaffold_0 (27935798-27935274)
               

               
               1-292, gnl|oryCun1|scaffold_151864 (878-359)
               

               
               1-292, gnl|panTro1|chr1 (92430430-92430946)
               

               
               1-292, gnl|rheMac2|chr1 (96287687-96288202)
               

               
               1-292, gnl|rn3|chr14 (2053284-2052768)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	1-292, gnl\|bosTau2\|chr3 (45872873-45873165)
	1-292, gnl\|canFam2\|chr6 (58885097-58884581)
	1-292, gnl\|echTel1\|scaffold_163046 (10005-9511)
	1-292, gnl\|hg17\|chr1 (93447914-93448430)
	1-292, gnl\|Hg17\|chr1 (93448123-93448415)
	1-292, gnl\|loxAfr1\|scaffold_141375 (4548-4044)
	1-292, gnl\|mm7\|chr5 (107409493-107410012)
	1-292, gnl\|Mm7\|chr5 (107409705-107409997)
	1-292, gnl\|monDom2\|scaffold_0 (27935798-27935274)
	1-292, gnl\|oryCun1\|scaffold_151864 (878-359)
	1-292, gnl\|panTro1\|chr1 (92430430-92430946)
	1-292, gnl\|rheMac2\|chr1 (96287687-96288202)
	1-292, gnl\|rn3\|chr14 (2053284-2052768)