Non-Coding RNA Search

reje35b_o18.y1

Sequence:


               
               TAGATCTACAACAACCTTGCTTTTATGAGACATAAAATCTTGTTCTGTTAAATTGCTGTG
ATTTGGGAGATGATTTTTCCTATAGCATAACCTAGTCTGGTAGTTCTCAAACTTCACTGC
ACATGAAAATCATTAGGTAAATGTGTGAAACACTGCTTGCTGGCCTTACTCCCAGTTTCT
GATTTAGTAAGTGTGGGATGTGGCCTAAGAGGTGTTTTTTCTAATAAATTCCTAGGTGAT
CATGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGATCTACAACAACCTTGCTTTTATGAGACATAAAATCTTGTTCTGTTAAATTGCTGTG
ATTTGGGAGATGATTTTTCCTATAGCATAACCTAGTCTGGTAGTTCTCAAACTTCACTGC
ACATGAAAATCATTAGGTAAATGTGTGAAACACTGCTTGCTGGCCTTACTCCCAGTTTCT
GATTTAGTAAGTGTGGGATGTGGCCTAAGAGGTGTTTTTTCTAATAAATTCCTAGGTGAT
CATGAAAAAAAAAAAAAAAAAA

Aligned organism(s): 12 entry(ies)

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Aligned organism(s): 12 entry(ies)

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               1-244, gnl|bosTau2|chr9 (27011333-27011090)
               

               
               1-244, gnl|canFam2|chr12 (62610249-62609644)
               

               
               1-244, gnl|dasNov1|scaffold_201 (144762-145362)
               

               
               1-244, gnl|hg17|chr6 (102194906-102195511)
               

               
               1-244, gnl|Hg17|chr6 (102195094-102195343)
               

               
               1-244, gnl|loxAfr1|scaffold_13721 (22676-23267)
               

               
               1-244, gnl|mm7|chr10 (49369074-49368530)
               

               
               1-244, gnl|Mm7|chr10 (49368884-49368669)
               

               
               1-244, gnl|oryCun1|scaffold_203454 (50993-50441)
               

               
               1-244, gnl|panTro1|chr5 (104179643-104180249)
               

               
               1-244, gnl|rheMac2|chr4 (97591123-97591728)
               

               
               1-244, gnl|rn3|chr20 (53716601-53716054)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-244, gnl|bosTau2|chr9 (27011333-27011090)
               

               
               1-244, gnl|canFam2|chr12 (62610249-62609644)
               

               
               1-244, gnl|dasNov1|scaffold_201 (144762-145362)
               

               
               1-244, gnl|hg17|chr6 (102194906-102195511)
               

               
               1-244, gnl|Hg17|chr6 (102195094-102195343)
               

               
               1-244, gnl|loxAfr1|scaffold_13721 (22676-23267)
               

               
               1-244, gnl|mm7|chr10 (49369074-49368530)
               

               
               1-244, gnl|Mm7|chr10 (49368884-49368669)
               

               
               1-244, gnl|oryCun1|scaffold_203454 (50993-50441)
               

               
               1-244, gnl|panTro1|chr5 (104179643-104180249)
               

               
               1-244, gnl|rheMac2|chr4 (97591123-97591728)
               

               
               1-244, gnl|rn3|chr20 (53716601-53716054)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	1-244, gnl\|bosTau2\|chr9 (27011333-27011090)
	1-244, gnl\|canFam2\|chr12 (62610249-62609644)
	1-244, gnl\|dasNov1\|scaffold_201 (144762-145362)
	1-244, gnl\|hg17\|chr6 (102194906-102195511)
	1-244, gnl\|Hg17\|chr6 (102195094-102195343)
	1-244, gnl\|loxAfr1\|scaffold_13721 (22676-23267)
	1-244, gnl\|mm7\|chr10 (49369074-49368530)
	1-244, gnl\|Mm7\|chr10 (49368884-49368669)
	1-244, gnl\|oryCun1\|scaffold_203454 (50993-50441)
	1-244, gnl\|panTro1\|chr5 (104179643-104180249)
	1-244, gnl\|rheMac2\|chr4 (97591123-97591728)
	1-244, gnl\|rn3\|chr20 (53716601-53716054)