Non-Coding RNA Search

reli1108b_j17r1.y1

Sequence:


               
               AATCCTGGTCCGGGACGGCATGCCCTCCCCCAGGAGCTTATTCAAAGCAGATGCTGCTAC
CAGCTTCCTGAGGGCAGCACGATCAGGTAACTTGGACAAAGCTTTGGATCACCTGCGGAA
TGGGGTAGACATTAACACCTGTAACCAGAATGGGTTGAACGGCTTGCATCTGGCCTCCAA
GGAAGGCCACGTGAAGATGGTGGTTGAACTTCTGCACAAAGAGATCATCTTGGAAACAAC
AACCAAGGACAAATACCAATTGCCTCCCCCCTCCCCGGGCTCCCGCTGTGGACCAGAGGC
AGGCTGTTATTTCTCTTCTGATGATCTCGCCTACCTGGCCGTGATCAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATCCTGGTCCGGGACGGCATGCCCTCCCCCAGGAGCTTATTCAAAGCAGATGCTGCTAC
CAGCTTCCTGAGGGCAGCACGATCAGGTAACTTGGACAAAGCTTTGGATCACCTGCGGAA
TGGGGTAGACATTAACACCTGTAACCAGAATGGGTTGAACGGCTTGCATCTGGCCTCCAA
GGAAGGCCACGTGAAGATGGTGGTTGAACTTCTGCACAAAGAGATCATCTTGGAAACAAC
AACCAAGGACAAATACCAATTGCCTCCCCCCTCCCCGGGCTCCCGCTGTGGACCAGAGGC
AGGCTGTTATTTCTCTTCTGATGATCTCGCCTACCTGGCCGTGATCAGG

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

Help | Less info


               
               47-148, gnl|bosTau2|chr27 (24350497-24350598)
               

               
               47-148, gnl|canFam2|chr16 (26820552-26820432)
               

               
               47-148, gnl|dasNov1|scaffold_47739 (14100-14220)
               

               
               47-148, gnl|echTel1|scaffold_307429 (3301-3421)
               

               
               47-148, gnl|galGal2|chrUn (817321-817446)
               

               
               47-148, gnl|hg17|chr8 (41734706-41734826)
               

               
               47-148, gnl|Hg17|chr8 (41734812-41734711)
               

               
               47-148, gnl|loxAfr1|scaffold_8430 (58951-59069)
               

               
               47-148, gnl|mm7|chr8 (21850377-21850257)
               

               
               47-148, gnl|Mm7|chr8 (21850269-21850370)
               

               
               47-148, gnl|monDom2|scaffold_1 (80430923-80430803)
               

               
               47-148, gnl|oryCun1|scaffold_198519 (200846-200962)
               

               
               47-148, gnl|panTro1|chr7 (43152099-43152219)
               

               
               47-148, gnl|rheMac2|chr8 (42315737-42315857)
               

               
               47-148, gnl|rn3|chr16 (73431339-73431459)
               

               
               47-148, gnl|tetNig1|chrUn_random (115036410-115036522)

Aligned organism(s): 16 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               47-148, gnl|bosTau2|chr27 (24350497-24350598)
               

               
               47-148, gnl|canFam2|chr16 (26820552-26820432)
               

               
               47-148, gnl|dasNov1|scaffold_47739 (14100-14220)
               

               
               47-148, gnl|echTel1|scaffold_307429 (3301-3421)
               

               
               47-148, gnl|galGal2|chrUn (817321-817446)
               

               
               47-148, gnl|hg17|chr8 (41734706-41734826)
               

               
               47-148, gnl|Hg17|chr8 (41734812-41734711)
               

               
               47-148, gnl|loxAfr1|scaffold_8430 (58951-59069)
               

               
               47-148, gnl|mm7|chr8 (21850377-21850257)
               

               
               47-148, gnl|Mm7|chr8 (21850269-21850370)
               

               
               47-148, gnl|monDom2|scaffold_1 (80430923-80430803)
               

               
               47-148, gnl|oryCun1|scaffold_198519 (200846-200962)
               

               
               47-148, gnl|panTro1|chr7 (43152099-43152219)
               

               
               47-148, gnl|rheMac2|chr8 (42315737-42315857)
               

               
               47-148, gnl|rn3|chr16 (73431339-73431459)
               

               
               47-148, gnl|tetNig1|chrUn_random (115036410-115036522)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eli (0.151814)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eli (0.151814)

	47-148, gnl\|bosTau2\|chr27 (24350497-24350598)
	47-148, gnl\|canFam2\|chr16 (26820552-26820432)
	47-148, gnl\|dasNov1\|scaffold_47739 (14100-14220)
	47-148, gnl\|echTel1\|scaffold_307429 (3301-3421)
	47-148, gnl\|galGal2\|chrUn (817321-817446)
	47-148, gnl\|hg17\|chr8 (41734706-41734826)
	47-148, gnl\|Hg17\|chr8 (41734812-41734711)
	47-148, gnl\|loxAfr1\|scaffold_8430 (58951-59069)
	47-148, gnl\|mm7\|chr8 (21850377-21850257)
	47-148, gnl\|Mm7\|chr8 (21850269-21850370)
	47-148, gnl\|monDom2\|scaffold_1 (80430923-80430803)
	47-148, gnl\|oryCun1\|scaffold_198519 (200846-200962)
	47-148, gnl\|panTro1\|chr7 (43152099-43152219)
	47-148, gnl\|rheMac2\|chr8 (42315737-42315857)
	47-148, gnl\|rn3\|chr16 (73431339-73431459)
	47-148, gnl\|tetNig1\|chrUn_random (115036410-115036522)