relu1306b_p19.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAACATTGTGTTAAGGTTGAACCTGTGAATCACACTGAACTATCTTCTGGTCCTGAATCT GAGAAAACATTGCCTTCAAAAACCATTAGCATCTCTGAAGAAGATCAGAGGGACAAAGAA GAGATTTCAGAAATGGAAACTCATTCTAGTCAGAAAACCTGTGTGTTTCCTTCTGCTGAT TCAGCTGTCATCCCTTCCAGGGACCAGAATATGACTTCTCCTGGTGCGAATAACAGTGAT GAGTTATTTGACAGTATCTCAGTAGATCCACTTCAGATGAGTGAACTGACCGATATTGCA GACATTATCAATGACCTTATAACAAAAGATGGAGTTTCCAGTGAAGAGCTCGGCCTGACG GAACAGCAGGCTAGGAGCATCTCCAGGATTCAGCCCTCCTCGGGTAGACGTCCACAGAGA ACGGAGGAGGAGAGAAGAGAGATTCAAGTCTGGATGAAAAGAAAACGAAAAGAAAGAATG GCAGAGTACCTGAATCAGCTGGCAGAGAAGAGAGGACAGGAGCACGAACCTTTCTGCCCC AGGAGCAGACCATTTTATATGACTTCCAGTGAAATCAGGCGGAGACAAAAGATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAACATTGTGTTAAGGTTGAACCTGTGAATCACACTGAACTATCTTCTGGTCCTGAATCT GAGAAAACATTGCCTTCAAAAACCATTAGCATCTCTGAAGAAGATCAGAGGGACAAAGAA GAGATTTCAGAAATGGAAACTCATTCTAGTCAGAAAACCTGTGTGTTTCCTTCTGCTGAT TCAGCTGTCATCCCTTCCAGGGACCAGAATATGACTTCTCCTGGTGCGAATAACAGTGAT GAGTTATTTGACAGTATCTCAGTAGATCCACTTCAGATGAGTGAACTGACCGATATTGCA GACATTATCAATGACCTTATAACAAAAGATGGAGTTTCCAGTGAAGAGCTCGGCCTGACG GAACAGCAGGCTAGGAGCATCTCCAGGATTCAGCCCTCCTCGGGTAGACGTCCACAGAGA ACGGAGGAGGAGAGAAGAGAGATTCAAGTCTGGATGAAAAGAAAACGAAAAGAAAGAATG GCAGAGTACCTGAATCAGCTGGCAGAGAAGAGAGGACAGGAGCACGAACCTTTCTGCCCC AGGAGCAGACCATTTTATATGACTTCCAGTGAAATCAGGCGGAGACAAAAGATG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 129-225, - strand, RNAz p=0.838174 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 129-225, - strand, RNAz p=0.838174 |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 98-225, gnl|bosTau2|chr20 (24634213-24634086) | |
| 98-225, gnl|canFam2|chr4 (74738569-74738234) | |
| 98-225, gnl|echTel1|scaffold_325340 (1206-872) | |
| 98-225, gnl|hg17|chr5 (37178027-37178396) | |
| 98-225, gnl|Hg17|chr5 (37178315-37178167) | |
| 98-225, gnl|loxAfr1|scaffold_34667 (27823-28180) | |
| 98-225, gnl|mm7|chr15 (8079276-8078911) | |
| 98-225, gnl|Mm7|chr15 (8078993-8079135) | |
| 98-225, gnl|oryCun1|scaffold_82172 (1232-1577) | |
| 98-225, gnl|panTro1|chr4 (79581845-79581476) | |
| 98-225, gnl|rheMac2|chr6 (36964622-36964985) | |
| 98-225, gnl|rn3|chr2 (57793284-57792951) | |
| 384-544, gnl|bosTau2|chr20 (24626928-24626768) | |
| 384-544, gnl|canFam2|chr4 (74754547-74754354) | |
| 384-544, gnl|dasNov1|scaffold_23169 (697-504) | |
| 384-544, gnl|echTel1|scaffold_325340 (10274-10095) | |
| 384-544, gnl|hg17|chr5 (37161083-37161276) | |
| 384-544, gnl|Hg17|chr5 (37161271-37161111) | |
| 384-544, gnl|loxAfr1|scaffold_34667 (21975-22168) | |
| 384-544, gnl|mm7|chr15 (8087522-8087335) | |
| 384-544, gnl|Mm7|chr15 (8087338-8087498) | |
| 384-544, gnl|monDom2|scaffold_20 (35030342-35030146) | |
| 384-544, gnl|oryCun1|scaffold_97224 (4092-3899) | |
| 384-544, gnl|panTro1|chr4 (79660002-79659809) | |
| 384-544, gnl|rheMac2|chr6 (36949215-36949408) | |
| 384-544, gnl|rn3|chr2 (57799143-57798952) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 98-225, gnl|bosTau2|chr20 (24634213-24634086) | |
| 98-225, gnl|canFam2|chr4 (74738569-74738234) | |
| 98-225, gnl|echTel1|scaffold_325340 (1206-872) | |
| 98-225, gnl|hg17|chr5 (37178027-37178396) | |
| 98-225, gnl|Hg17|chr5 (37178315-37178167) | |
| 98-225, gnl|loxAfr1|scaffold_34667 (27823-28180) | |
| 98-225, gnl|mm7|chr15 (8079276-8078911) | |
| 98-225, gnl|Mm7|chr15 (8078993-8079135) | |
| 98-225, gnl|oryCun1|scaffold_82172 (1232-1577) | |
| 98-225, gnl|panTro1|chr4 (79581845-79581476) | |
| 98-225, gnl|rheMac2|chr6 (36964622-36964985) | |
| 98-225, gnl|rn3|chr2 (57793284-57792951) | |
| 384-544, gnl|bosTau2|chr20 (24626928-24626768) | |
| 384-544, gnl|canFam2|chr4 (74754547-74754354) | |
| 384-544, gnl|dasNov1|scaffold_23169 (697-504) | |
| 384-544, gnl|echTel1|scaffold_325340 (10274-10095) | |
| 384-544, gnl|hg17|chr5 (37161083-37161276) | |
| 384-544, gnl|Hg17|chr5 (37161271-37161111) | |
| 384-544, gnl|loxAfr1|scaffold_34667 (21975-22168) | |
| 384-544, gnl|mm7|chr15 (8087522-8087335) | |
| 384-544, gnl|Mm7|chr15 (8087338-8087498) | |
| 384-544, gnl|monDom2|scaffold_20 (35030342-35030146) | |
| 384-544, gnl|oryCun1|scaffold_97224 (4092-3899) | |
| 384-544, gnl|panTro1|chr4 (79660002-79659809) | |
| 384-544, gnl|rheMac2|chr6 (36949215-36949408) | |
| 384-544, gnl|rn3|chr2 (57799143-57798952) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| elu (0.385356) |