Non-Coding RNA Search

relu1324c_a2.y1

Sequence:


               
               CCTATCAGATTGTTGTGGAGGAACTGCACCCTCACCGAACCAAGAGGGAAGCCGGGGCCA
TGGAATGCTACCAGGTTCCTGTCACGTACCAAAATGCCATGAGTGGGGGGGCGCCGTACT
ACTTCGCTGCGGAACTACCCCCAGGGAATCTTCCCGAACCTGCCCCATTCACAGTGGGCG
ATAACAGGACCTATCAGGGCTTTTGGAACCCCCCTTTGGCTCCACGCAAAGGATACAACA
TCTATTTCCAGGCGATGAGTAGTGTGGAGAAGGAAACTAAAACCCAGTGTGTGCGAATTG
CTACCAAAGCAGCAGCAACAGAAGAACCAGAAGTGATTCCAGACCCAGCCAAGCAGACAG
ACAGAGTGGTGAAGATAGCAGGAATTAGTGCTGGGATTTTGGTGTTCATCCTTCTCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTATCAGATTGTTGTGGAGGAACTGCACCCTCACCGAACCAAGAGGGAAGCCGGGGCCA
TGGAATGCTACCAGGTTCCTGTCACGTACCAAAATGCCATGAGTGGGGGGGCGCCGTACT
ACTTCGCTGCGGAACTACCCCCAGGGAATCTTCCCGAACCTGCCCCATTCACAGTGGGCG
ATAACAGGACCTATCAGGGCTTTTGGAACCCCCCTTTGGCTCCACGCAAAGGATACAACA
TCTATTTCCAGGCGATGAGTAGTGTGGAGAAGGAAACTAAAACCCAGTGTGTGCGAATTG
CTACCAAAGCAGCAGCAACAGAAGAACCAGAAGTGATTCCAGACCCAGCCAAGCAGACAG
ACAGAGTGGTGAAGATAGCAGGAATTAGTGCTGGGATTTTGGTGTTCATCCTTCTCCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5JRN8_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5JRN8_HUMAN

Aligned organism(s): 18 entry(ies)

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Aligned organism(s): 18 entry(ies)

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               308-419, gnl|bosTau2|chr13 (45831686-45831797)
               

               
               308-419, gnl|canFam2|chr1 (69700342-69700467)
               

               
               308-419, gnl|danRer3|chr20 (1854909-1854794)
               

               
               308-419, gnl|dasNov1|scaffold_28593 (10860-10971)
               

               
               308-419, gnl|echTel1|scaffold_112439 (234-358)
               

               
               308-419, gnl|fr1|chrUn (212737393-212737282)
               

               
               308-419, gnl|galGal2|chr3 (57260657-57260536)
               

               
               308-419, gnl|hg17|chr6 (128371950-128372075)
               

               
               308-419, gnl|Hg17|chr6 (128372108-128371997)
               

               
               308-419, gnl|loxAfr1|scaffold_3975 (64947-65072)
               

               
               308-419, gnl|mm7|chr10 (28332453-28332329)
               

               
               308-419, gnl|Mm7|chr10 (28332294-28332405)
               

               
               308-419, gnl|monDom2|scaffold_0 (85263003-85262875)
               

               
               308-419, gnl|oryCun1|scaffold_205950 (101685-101561)
               

               
               308-419, gnl|panTro1|chr5 (130916164-130916289)
               

               
               308-419, gnl|rheMac2|chr10 (22197061-22196937)
               

               
               308-419, gnl|tetNig1|chr14 (4322403-4322520)
               

               
               308-419, gnl|xenTro1|scaffold_926 (375697-375818)

Aligned organism(s): 18 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               308-419, gnl|bosTau2|chr13 (45831686-45831797)
               

               
               308-419, gnl|canFam2|chr1 (69700342-69700467)
               

               
               308-419, gnl|danRer3|chr20 (1854909-1854794)
               

               
               308-419, gnl|dasNov1|scaffold_28593 (10860-10971)
               

               
               308-419, gnl|echTel1|scaffold_112439 (234-358)
               

               
               308-419, gnl|fr1|chrUn (212737393-212737282)
               

               
               308-419, gnl|galGal2|chr3 (57260657-57260536)
               

               
               308-419, gnl|hg17|chr6 (128371950-128372075)
               

               
               308-419, gnl|Hg17|chr6 (128372108-128371997)
               

               
               308-419, gnl|loxAfr1|scaffold_3975 (64947-65072)
               

               
               308-419, gnl|mm7|chr10 (28332453-28332329)
               

               
               308-419, gnl|Mm7|chr10 (28332294-28332405)
               

               
               308-419, gnl|monDom2|scaffold_0 (85263003-85262875)
               

               
               308-419, gnl|oryCun1|scaffold_205950 (101685-101561)
               

               
               308-419, gnl|panTro1|chr5 (130916164-130916289)
               

               
               308-419, gnl|rheMac2|chr10 (22197061-22196937)
               

               
               308-419, gnl|tetNig1|chr14 (4322403-4322520)
               

               
               308-419, gnl|xenTro1|scaffold_926 (375697-375818)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               elu (0.385356)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)

	308-419, gnl\|bosTau2\|chr13 (45831686-45831797)
	308-419, gnl\|canFam2\|chr1 (69700342-69700467)
	308-419, gnl\|danRer3\|chr20 (1854909-1854794)
	308-419, gnl\|dasNov1\|scaffold_28593 (10860-10971)
	308-419, gnl\|echTel1\|scaffold_112439 (234-358)
	308-419, gnl\|fr1\|chrUn (212737393-212737282)
	308-419, gnl\|galGal2\|chr3 (57260657-57260536)
	308-419, gnl\|hg17\|chr6 (128371950-128372075)
	308-419, gnl\|Hg17\|chr6 (128372108-128371997)
	308-419, gnl\|loxAfr1\|scaffold_3975 (64947-65072)
	308-419, gnl\|mm7\|chr10 (28332453-28332329)
	308-419, gnl\|Mm7\|chr10 (28332294-28332405)
	308-419, gnl\|monDom2\|scaffold_0 (85263003-85262875)
	308-419, gnl\|oryCun1\|scaffold_205950 (101685-101561)
	308-419, gnl\|panTro1\|chr5 (130916164-130916289)
	308-419, gnl\|rheMac2\|chr10 (22197061-22196937)
	308-419, gnl\|tetNig1\|chr14 (4322403-4322520)
	308-419, gnl\|xenTro1\|scaffold_926 (375697-375818)