Non-Coding RNA Search

reru01c_e11.y1

Sequence:


               
               CTTTCTTCCCTGTTGCACGTGAAGCTCCCGAGAGACCCCTTAGGTGGCGGCCACTGGCCC
GCAGCCTGTCCCCCTCCCCTTCCCCCCTGAACTAAATGCTGGTTCTGTCCCCTACTTGGG
GCTTGTGTGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTCTTCCCTGTTGCACGTGAAGCTCCCGAGAGACCCCTTAGGTGGCGGCCACTGGCCC
GCAGCCTGTCCCCCTCCCCTTCCCCCCTGAACTAAATGCTGGTTCTGTCCCCTACTTGGG
GCTTGTGTGTC

Aligned organism(s): 12 entry(ies)

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Aligned organism(s): 12 entry(ies)

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               1-128, gnl|bosTau2|chr25 (32496742-32496868)
               

               
               1-128, gnl|canFam2|chr6 (12214998-12214617)
               

               
               1-128, gnl|echTel1|scaffold_314139 (7671-7222)
               

               
               1-128, gnl|hg17|chr7 (99705977-99706466)
               

               
               1-128, gnl|Hg17|chr7 (99706445-99706311)
               

               
               1-128, gnl|loxAfr1|scaffold_6966 (751-1220)
               

               
               1-128, gnl|mm7|chr5 (136680282-136679771)
               

               
               1-128, gnl|Mm7|chr5 (136679791-136679915)
               

               
               1-128, gnl|monDom2|scaffold_66 (2269240-2269771)
               

               
               1-128, gnl|panTro1|chr6 (101490424-101490904)
               

               
               1-128, gnl|rheMac2|chr3 (47637370-47637861)
               

               
               1-128, gnl|rn3|chr12 (19818722-19818248)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-128, gnl|bosTau2|chr25 (32496742-32496868)
               

               
               1-128, gnl|canFam2|chr6 (12214998-12214617)
               

               
               1-128, gnl|echTel1|scaffold_314139 (7671-7222)
               

               
               1-128, gnl|hg17|chr7 (99705977-99706466)
               

               
               1-128, gnl|Hg17|chr7 (99706445-99706311)
               

               
               1-128, gnl|loxAfr1|scaffold_6966 (751-1220)
               

               
               1-128, gnl|mm7|chr5 (136680282-136679771)
               

               
               1-128, gnl|Mm7|chr5 (136679791-136679915)
               

               
               1-128, gnl|monDom2|scaffold_66 (2269240-2269771)
               

               
               1-128, gnl|panTro1|chr6 (101490424-101490904)
               

               
               1-128, gnl|rheMac2|chr3 (47637370-47637861)
               

               
               1-128, gnl|rn3|chr12 (19818722-19818248)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	1-128, gnl\|bosTau2\|chr25 (32496742-32496868)
	1-128, gnl\|canFam2\|chr6 (12214998-12214617)
	1-128, gnl\|echTel1\|scaffold_314139 (7671-7222)
	1-128, gnl\|hg17\|chr7 (99705977-99706466)
	1-128, gnl\|Hg17\|chr7 (99706445-99706311)
	1-128, gnl\|loxAfr1\|scaffold_6966 (751-1220)
	1-128, gnl\|mm7\|chr5 (136680282-136679771)
	1-128, gnl\|Mm7\|chr5 (136679791-136679915)
	1-128, gnl\|monDom2\|scaffold_66 (2269240-2269771)
	1-128, gnl\|panTro1\|chr6 (101490424-101490904)
	1-128, gnl\|rheMac2\|chr3 (47637370-47637861)
	1-128, gnl\|rn3\|chr12 (19818722-19818248)