Non-Coding RNA Search

reru03c_i12.y1

Sequence:


               
               CCAGAGCGCTGGGGACCAGGCCGCTTCGACTACTGGGGTAACTCACACCAGATCATGCAC
CTGCTCAGCGTGGTGCTCCATCCTCCAGCTGCACGCTGGTGTCGTGCCCGACCTGCTCTG
GGCCGCCCACCACACCTGCCCCCCGGACTGAGCCATCTCCCACCTGCCATGCTGGTCTGC
CCGGTCTTCTAGGGCCAGCGGCTCCATGCTTCCCTCCTCTGCTGGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAGAGCGCTGGGGACCAGGCCGCTTCGACTACTGGGGTAACTCACACCAGATCATGCAC
CTGCTCAGCGTGGTGCTCCATCCTCCAGCTGCACGCTGGTGTCGTGCCCGACCTGCTCTG
GGCCGCCCACCACACCTGCCCCCCGGACTGAGCCATCTCCCACCTGCCATGCTGGTCTGC
CCGGTCTTCTAGGGCCAGCGGCTCCATGCTTCCCTCCTCTGCTGGTT

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               1-225, gnl|bosTau2|chr25 (3448186-3448404)
               

               
               1-225, gnl|canFam2|chr6 (41253460-41252993)
               

               
               1-225, gnl|danRer3|chr3 (25935249-25934801)
               

               
               1-225, gnl|echTel1|scaffold_294208 (5436-5014)
               

               
               1-225, gnl|fr1|chrUn (276171147-276171614)
               

               
               1-225, gnl|hg17|chr16 (2961490-2961952)
               

               
               1-225, gnl|Hg17|chr16 (2961801-2962017)
               

               
               1-225, gnl|mm7|chr17 (21917930-21917430)
               

               
               1-225, gnl|Mm7|chr17 (21917590-21917369)
               

               
               1-225, gnl|monDom2|scaffold_49 (6638183-6637733)
               

               
               1-225, gnl|rheMac2|chr20 (3112495-3112956)
               

               
               1-225, gnl|rn3|chr10 (12995003-12994529)
               

               
               1-225, gnl|tetNig1|chr3 (13781343-13781785)
               

               
               1-225, gnl|xenTro1|scaffold_638 (624936-624484)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-225, gnl|bosTau2|chr25 (3448186-3448404)
               

               
               1-225, gnl|canFam2|chr6 (41253460-41252993)
               

               
               1-225, gnl|danRer3|chr3 (25935249-25934801)
               

               
               1-225, gnl|echTel1|scaffold_294208 (5436-5014)
               

               
               1-225, gnl|fr1|chrUn (276171147-276171614)
               

               
               1-225, gnl|hg17|chr16 (2961490-2961952)
               

               
               1-225, gnl|Hg17|chr16 (2961801-2962017)
               

               
               1-225, gnl|mm7|chr17 (21917930-21917430)
               

               
               1-225, gnl|Mm7|chr17 (21917590-21917369)
               

               
               1-225, gnl|monDom2|scaffold_49 (6638183-6637733)
               

               
               1-225, gnl|rheMac2|chr20 (3112495-3112956)
               

               
               1-225, gnl|rn3|chr10 (12995003-12994529)
               

               
               1-225, gnl|tetNig1|chr3 (13781343-13781785)
               

               
               1-225, gnl|xenTro1|scaffold_638 (624936-624484)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	1-225, gnl\|bosTau2\|chr25 (3448186-3448404)
	1-225, gnl\|canFam2\|chr6 (41253460-41252993)
	1-225, gnl\|danRer3\|chr3 (25935249-25934801)
	1-225, gnl\|echTel1\|scaffold_294208 (5436-5014)
	1-225, gnl\|fr1\|chrUn (276171147-276171614)
	1-225, gnl\|hg17\|chr16 (2961490-2961952)
	1-225, gnl\|Hg17\|chr16 (2961801-2962017)
	1-225, gnl\|mm7\|chr17 (21917930-21917430)
	1-225, gnl\|Mm7\|chr17 (21917590-21917369)
	1-225, gnl\|monDom2\|scaffold_49 (6638183-6637733)
	1-225, gnl\|rheMac2\|chr20 (3112495-3112956)
	1-225, gnl\|rn3\|chr10 (12995003-12994529)
	1-225, gnl\|tetNig1\|chr3 (13781343-13781785)
	1-225, gnl\|xenTro1\|scaffold_638 (624936-624484)