Non-Coding RNA Search

reru11c_p18.y1

Sequence:


               
               GACAGATGAGACCCTGACTCATAACCTGGGAGCGGATCCCTTTTATTTTTACTGATGAGT
ATTTGATGTCTTCAGATGTTCTTCTAAAGTTTAAAAACAATAGCGAAAAAAAAAATCAAA
AACCAAAAAAACAAAACCTAGTTGATCCACCAAATATATCAACAATAGACAGAATTTCAA
GGACTTTTAAATACATTCTTCAGGCAGAAGCACATCTGGATCCTACAAATTAAATGGCTT
TTTCCTCGGTAAAATCCCAGGCCTCCATAACTTCCACTGGTGGACTTTAGAGTTGTAACC
TTTGCCGTTAGAAAGTTATTTAATCCCCAGTCAACACCTCTGACTACAGTGAATGGAAGC
CAATTTCCTCCTGCTTTTCTTTTGAAGCGCTGGGGGTGCGGGGGGCAGTGGGTCAAATCT
GTTTTTTACCAATAAACCTTCCAAACATTTAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACAGATGAGACCCTGACTCATAACCTGGGAGCGGATCCCTTTTATTTTTACTGATGAGT
ATTTGATGTCTTCAGATGTTCTTCTAAAGTTTAAAAACAATAGCGAAAAAAAAAATCAAA
AACCAAAAAAACAAAACCTAGTTGATCCACCAAATATATCAACAATAGACAGAATTTCAA
GGACTTTTAAATACATTCTTCAGGCAGAAGCACATCTGGATCCTACAAATTAAATGGCTT
TTTCCTCGGTAAAATCCCAGGCCTCCATAACTTCCACTGGTGGACTTTAGAGTTGTAACC
TTTGCCGTTAGAAAGTTATTTAATCCCCAGTCAACACCTCTGACTACAGTGAATGGAAGC
CAATTTCCTCCTGCTTTTCTTTTGAAGCGCTGGGGGTGCGGGGGGCAGTGGGTCAAATCT
GTTTTTTACCAATAAACCTTCCAAACATTTAAAAAAAAA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               2-454, gnl|bosTau2|chr6 (35788371-35788842)
               

               
               2-454, gnl|canFam2|chr13 (50382909-50383406)
               

               
               2-454, gnl|dasNov1|scaffold_4215 (54453-53976)
               

               
               2-454, gnl|echTel1|scaffold_280257 (11806-11293)
               

               
               2-454, gnl|hg17|chr4 (55795190-55795690)
               

               
               2-454, gnl|Hg17|chr4 (55795787-55795376)
               

               
               2-454, gnl|loxAfr1|scaffold_2090 (83435-82928)
               

               
               2-454, gnl|mm7|chr5 (75360545-75361045)
               

               
               2-454, gnl|Mm7|chr5 (75361505-75360733)
               

               
               2-454, gnl|oryCun1|scaffold_191588 (2579-2080)
               

               
               2-454, gnl|panTro1|chr3 (90849479-90848979)
               

               
               2-454, gnl|rheMac2|chr5 (74309409-74308905)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-454, gnl|bosTau2|chr6 (35788371-35788842)
               

               
               2-454, gnl|canFam2|chr13 (50382909-50383406)
               

               
               2-454, gnl|dasNov1|scaffold_4215 (54453-53976)
               

               
               2-454, gnl|echTel1|scaffold_280257 (11806-11293)
               

               
               2-454, gnl|hg17|chr4 (55795190-55795690)
               

               
               2-454, gnl|Hg17|chr4 (55795787-55795376)
               

               
               2-454, gnl|loxAfr1|scaffold_2090 (83435-82928)
               

               
               2-454, gnl|mm7|chr5 (75360545-75361045)
               

               
               2-454, gnl|Mm7|chr5 (75361505-75360733)
               

               
               2-454, gnl|oryCun1|scaffold_191588 (2579-2080)
               

               
               2-454, gnl|panTro1|chr3 (90849479-90848979)
               

               
               2-454, gnl|rheMac2|chr5 (74309409-74308905)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	2-454, gnl\|bosTau2\|chr6 (35788371-35788842)
	2-454, gnl\|canFam2\|chr13 (50382909-50383406)
	2-454, gnl\|dasNov1\|scaffold_4215 (54453-53976)
	2-454, gnl\|echTel1\|scaffold_280257 (11806-11293)
	2-454, gnl\|hg17\|chr4 (55795190-55795690)
	2-454, gnl\|Hg17\|chr4 (55795787-55795376)
	2-454, gnl\|loxAfr1\|scaffold_2090 (83435-82928)
	2-454, gnl\|mm7\|chr5 (75360545-75361045)
	2-454, gnl\|Mm7\|chr5 (75361505-75360733)
	2-454, gnl\|oryCun1\|scaffold_191588 (2579-2080)
	2-454, gnl\|panTro1\|chr3 (90849479-90848979)
	2-454, gnl\|rheMac2\|chr5 (74309409-74308905)