Non-Coding RNA Search

reru12c_k14.y1

Sequence:


               
               CGGATGAAAAGTACGCGCCAGAGGGTTGTTCGCACCCTGGGAGTTACCAAAGCGTGGTGG
CCTTGAGGAATGGAAACATTTTAAAGGCCCTCAACATTACATGTAGACTAGAGGGAAGTG
GGAAAAAAAAAATCTAAAGATGAAGGCATTTCAGACCATCTGCAGGCAGCTTAAAAGTTC
AAAGGGGTTTTCTGTAGAACCAGCCTCCCATGTGGTTTTCTCCACTTCCTCTTATTTGTG
TGGCCGGAAGAAAAAAGTGAACCCCTATGAAGAAGTGGACCAAGAAAAGTACTCTGATTT
AGTAAAGTCTGTCTTGTCATTCAGAGGCCATGCTCAGACTCCAGAATCATTGTTTAAGGA
AGATGCTTTACTCTATGGACCTGTGAGTAAGTGTAAGGCCTCAAAGCAAGAAGAGGAAGC
AGGAGTTCCACAAAACTGGTTTCCTCTCTTCAATCCAGAGAAAAGTGTAAAACCAACTGC
AACAAGTGATCCTACAATTCCTTTGAAAATCCCTTTGCAAAGGAATATGATACCAAGTGT
GACCCGAGTCCTTCAGCAGACCATGACATCGGAACAGATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGATGAAAAGTACGCGCCAGAGGGTTGTTCGCACCCTGGGAGTTACCAAAGCGTGGTGG
CCTTGAGGAATGGAAACATTTTAAAGGCCCTCAACATTACATGTAGACTAGAGGGAAGTG
GGAAAAAAAAAATCTAAAGATGAAGGCATTTCAGACCATCTGCAGGCAGCTTAAAAGTTC
AAAGGGGTTTTCTGTAGAACCAGCCTCCCATGTGGTTTTCTCCACTTCCTCTTATTTGTG
TGGCCGGAAGAAAAAAGTGAACCCCTATGAAGAAGTGGACCAAGAAAAGTACTCTGATTT
AGTAAAGTCTGTCTTGTCATTCAGAGGCCATGCTCAGACTCCAGAATCATTGTTTAAGGA
AGATGCTTTACTCTATGGACCTGTGAGTAAGTGTAAGGCCTCAAAGCAAGAAGAGGAAGC
AGGAGTTCCACAAAACTGGTTTCCTCTCTTCAATCCAGAGAAAAGTGTAAAACCAACTGC
AACAAGTGATCCTACAATTCCTTTGAAAATCCCTTTGCAAAGGAATATGATACCAAGTGT
GACCCGAGTCCTTCAGCAGACCATGACATCGGAACAGATT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55957203|emb|CAI14861.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55957203|emb|CAI14861.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               66-578, gnl|bosTau2|chr13 (21956118-21956626)
               

               
               66-578, gnl|Hg17|chr20 (17898442-17898938)
               

               
               66-578, gnl|Mm7|chr2 (144012767-144013266)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               66-578, gnl|bosTau2|chr13 (21956118-21956626)
               

               
               66-578, gnl|Hg17|chr20 (17898442-17898938)
               

               
               66-578, gnl|Mm7|chr2 (144012767-144013266)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	66-578, gnl\|bosTau2\|chr13 (21956118-21956626)
	66-578, gnl\|Hg17\|chr20 (17898442-17898938)
	66-578, gnl\|Mm7\|chr2 (144012767-144013266)