Non-Coding RNA Search

reru23c_f4.y1

Sequence:


               
               CTGGCCCATTGTCCCAGCAGGAGGGCAGTGGGGGAAGGGATTGATGAAAAGCCAAATGTG
ACTGGCCGCCCCCAGCCCAGCCATCAGCTGCTAGACAGTGGTGGTAATTTCTAATGACAG
ATCTCAGGTTTCACCCTGGTGAGAAAACAACAGGCCAGACAAGTGGGGATAAAAGAAAAG
AGGAGAAAGGGTGGGGGAGGTGGTCTTCTCTGGCTGTTCCGAGGGGCAGGAGGGGTGCTC
TGGGCGGCTTTGGGGTCGCCTCTGGGTGTGGGTGTGTGCCAAGGGCCCACGCCTCAGCCT
GGCCGGGAGCCTGGCCCTGGGAGCAGCCATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGCCCATTGTCCCAGCAGGAGGGCAGTGGGGGAAGGGATTGATGAAAAGCCAAATGTG
ACTGGCCGCCCCCAGCCCAGCCATCAGCTGCTAGACAGTGGTGGTAATTTCTAATGACAG
ATCTCAGGTTTCACCCTGGTGAGAAAACAACAGGCCAGACAAGTGGGGATAAAAGAAAAG
AGGAGAAAGGGTGGGGGAGGTGGTCTTCTCTGGCTGTTCCGAGGGGCAGGAGGGGTGCTC
TGGGCGGCTTTGGGGTCGCCTCTGGGTGTGGGTGTGTGCCAAGGGCCCACGCCTCAGCCT
GGCCGGGAGCCTGGCCCTGGGAGCAGCCATC

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               84-310, gnl|bosTau2|chr2 (81944145-81943918)
               

               
               84-310, gnl|canFam2|chr2 (78285765-78285145)
               

               
               84-310, gnl|echTel1|scaffold_277142 (45970-45341)
               

               
               84-310, gnl|hg17|chr1 (24307818-24308485)
               

               
               84-310, gnl|Hg17|chr1 (24307875-24308124)
               

               
               84-310, gnl|mm7|chr4 (135023965-135023373)
               

               
               84-310, gnl|Mm7|chr4 (135023900-135023693)
               

               
               84-310, gnl|panTro1|chr1 (24699705-24700372)
               

               
               84-310, gnl|rheMac2|chr1 (26874149-26874804)
               

               
               84-310, gnl|rn3|chr5 (154427449-154426865)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               84-310, gnl|bosTau2|chr2 (81944145-81943918)
               

               
               84-310, gnl|canFam2|chr2 (78285765-78285145)
               

               
               84-310, gnl|echTel1|scaffold_277142 (45970-45341)
               

               
               84-310, gnl|hg17|chr1 (24307818-24308485)
               

               
               84-310, gnl|Hg17|chr1 (24307875-24308124)
               

               
               84-310, gnl|mm7|chr4 (135023965-135023373)
               

               
               84-310, gnl|Mm7|chr4 (135023900-135023693)
               

               
               84-310, gnl|panTro1|chr1 (24699705-24700372)
               

               
               84-310, gnl|rheMac2|chr1 (26874149-26874804)
               

               
               84-310, gnl|rn3|chr5 (154427449-154426865)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	84-310, gnl\|bosTau2\|chr2 (81944145-81943918)
	84-310, gnl\|canFam2\|chr2 (78285765-78285145)
	84-310, gnl\|echTel1\|scaffold_277142 (45970-45341)
	84-310, gnl\|hg17\|chr1 (24307818-24308485)
	84-310, gnl\|Hg17\|chr1 (24307875-24308124)
	84-310, gnl\|mm7\|chr4 (135023965-135023373)
	84-310, gnl\|Mm7\|chr4 (135023900-135023693)
	84-310, gnl\|panTro1\|chr1 (24699705-24700372)
	84-310, gnl\|rheMac2\|chr1 (26874149-26874804)
	84-310, gnl\|rn3\|chr5 (154427449-154426865)