Non-Coding RNA Search

reru24c_d12.y1

Sequence:


               
               GAGGTCCACTTGAAAATTAATGGATGGATGGATGGATAGTTTAAAAAGGCATAGATAGGT
ATATAAGATCACATACATGATAAGTTTTATATGAGTATTAAATGACATAGCACATATCAA
GTGCTTAGTGAAATTTTTGGCACAGAAAAAATACTGAACAAATGTAAGCTACTAGCATAA
TTGTTATGATGCTTCATGGACTCTACAATGCTACAAAAACCAGTGAAAAAGAAAATTACC
ACATATAATAGTATAGCACAGTGAAGTGTGAATAAAAGACATCTTCCTTTAAGTAAAAAG
TTGAACTGCAACAAGAAAGCAGTATTTGACTCTAAGGGTAACATTTATGGAGGAAGTAAT
TACTACTTCAAATATCTAAAGTCCTAGCAGCTCTAAAATAACCTTTCCTAGTTTAGTGAA
AATCGTAGTGTCATGTTATTTTTCTAAATGCCCATGTTAGCTTAACACAGAGAAACAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGTCCACTTGAAAATTAATGGATGGATGGATGGATAGTTTAAAAAGGCATAGATAGGT
ATATAAGATCACATACATGATAAGTTTTATATGAGTATTAAATGACATAGCACATATCAA
GTGCTTAGTGAAATTTTTGGCACAGAAAAAATACTGAACAAATGTAAGCTACTAGCATAA
TTGTTATGATGCTTCATGGACTCTACAATGCTACAAAAACCAGTGAAAAAGAAAATTACC
ACATATAATAGTATAGCACAGTGAAGTGTGAATAAAAGACATCTTCCTTTAAGTAAAAAG
TTGAACTGCAACAAGAAAGCAGTATTTGACTCTAAGGGTAACATTTATGGAGGAAGTAAT
TACTACTTCAAATATCTAAAGTCCTAGCAGCTCTAAAATAACCTTTCCTAGTTTAGTGAA
AATCGTAGTGTCATGTTATTTTTCTAAATGCCCATGTTAGCTTAACACAGAGAAACAAT

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               16-475, gnl|bosTau2|chr3 (1479719-1479255)
               

               
               16-475, gnl|canFam2|chr16 (39782042-39782679)
               

               
               16-475, gnl|dasNov1|scaffold_9597 (9653-10406)
               

               
               16-475, gnl|echTel1|scaffold_221949 (5208-4499)
               

               
               16-475, gnl|hg17|chr8 (13294095-13294817)
               

               
               16-475, gnl|Hg17|chr8 (13294962-13294449)
               

               
               16-475, gnl|mm7|chr8 (35616026-35616710)
               

               
               16-475, gnl|Mm7|chr8 (35616825-35616391)
               

               
               16-475, gnl|oryCun1|scaffold_214110 (1182-481)
               

               
               16-475, gnl|panTro1|chr7 (13900581-13901306)
               

               
               16-475, gnl|rheMac2|chr8 (13211132-13211862)
               

               
               16-475, gnl|rn3|chr16 (59078485-59077813)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-475, gnl|bosTau2|chr3 (1479719-1479255)
               

               
               16-475, gnl|canFam2|chr16 (39782042-39782679)
               

               
               16-475, gnl|dasNov1|scaffold_9597 (9653-10406)
               

               
               16-475, gnl|echTel1|scaffold_221949 (5208-4499)
               

               
               16-475, gnl|hg17|chr8 (13294095-13294817)
               

               
               16-475, gnl|Hg17|chr8 (13294962-13294449)
               

               
               16-475, gnl|mm7|chr8 (35616026-35616710)
               

               
               16-475, gnl|Mm7|chr8 (35616825-35616391)
               

               
               16-475, gnl|oryCun1|scaffold_214110 (1182-481)
               

               
               16-475, gnl|panTro1|chr7 (13900581-13901306)
               

               
               16-475, gnl|rheMac2|chr8 (13211132-13211862)
               

               
               16-475, gnl|rn3|chr16 (59078485-59077813)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	16-475, gnl\|bosTau2\|chr3 (1479719-1479255)
	16-475, gnl\|canFam2\|chr16 (39782042-39782679)
	16-475, gnl\|dasNov1\|scaffold_9597 (9653-10406)
	16-475, gnl\|echTel1\|scaffold_221949 (5208-4499)
	16-475, gnl\|hg17\|chr8 (13294095-13294817)
	16-475, gnl\|Hg17\|chr8 (13294962-13294449)
	16-475, gnl\|mm7\|chr8 (35616026-35616710)
	16-475, gnl\|Mm7\|chr8 (35616825-35616391)
	16-475, gnl\|oryCun1\|scaffold_214110 (1182-481)
	16-475, gnl\|panTro1\|chr7 (13900581-13901306)
	16-475, gnl\|rheMac2\|chr8 (13211132-13211862)
	16-475, gnl\|rn3\|chr16 (59078485-59077813)