Non-Coding RNA Search

reru26c_n9.y1

Sequence:


               
               TTCTTAGTGTCTGTGCGGCCAGCGGCTCAGGGCCAGTGGTGGAGGGGGATACCCGCGGGG
GGACGGAGTGGGCGGAGCCTGTGGGATGGCGCAGTTTTCCGGCCTCCCTCGCCGCTGGGC
GCAGTGGGGGTGGCGCGCAGTCCGTTGACCCCGCCGCCGGTGAGGGAGGAGGCGGTGGAT
TTGCCGGTGCTGCTGTGGTGGAGCCCAGGGCTGTTTCCTCACTTCCCGGGCGACTCGGAG
CGCATCGAGTGCGCGCGCGGCGCGTGCGTGGCGTCCCGGGACCGACGGGTGCGGGGAGAC
TCGCGGACGCGCGCTCTGCTTATCTACGGCACCGACTTCCGCGCGTCGGAGGCGCCGCTG
CCGCGCCTGGCGCACCAGAGCTGGGCGCTCCTACACGAGGAGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCTTAGTGTCTGTGCGGCCAGCGGCTCAGGGCCAGTGGTGGAGGGGGATACCCGCGGGG
GGACGGAGTGGGCGGAGCCTGTGGGATGGCGCAGTTTTCCGGCCTCCCTCGCCGCTGGGC
GCAGTGGGGGTGGCGCGCAGTCCGTTGACCCCGCCGCCGGTGAGGGAGGAGGCGGTGGAT
TTGCCGGTGCTGCTGTGGTGGAGCCCAGGGCTGTTTCCTCACTTCCCGGGCGACTCGGAG
CGCATCGAGTGCGCGCGCGGCGCGTGCGTGGCGTCCCGGGACCGACGGGTGCGGGGAGAC
TCGCGGACGCGCGCTCTGCTTATCTACGGCACCGACTTCCGCGCGTCGGAGGCGCCGCTG
CCGCGCCTGGCGCACCAGAGCTGGGCGCTCCTACACGAGGAGTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34533240|dbj|BAC86637.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34533240|dbj|BAC86637.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               82-201, + strand, RNAz p=0.676397

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               82-201, + strand, RNAz p=0.676397

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-404, gnl|bosTau2|chr28 (22906669-22907069)
               

               
               3-404, gnl|Hg17|chr10 (75202143-75202543)
               

               
               3-404, gnl|Mm7|chr14 (18351605-18351993)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-404, gnl|bosTau2|chr28 (22906669-22907069)
               

               
               3-404, gnl|Hg17|chr10 (75202143-75202543)
               

               
               3-404, gnl|Mm7|chr14 (18351605-18351993)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	3-404, gnl\|bosTau2\|chr28 (22906669-22907069)
	3-404, gnl\|Hg17\|chr10 (75202143-75202543)
	3-404, gnl\|Mm7\|chr14 (18351605-18351993)