Non-Coding RNA Search

reru31c_e1.y1

Sequence:


               
               GTTGTGTCTCTCTTTTCTCCCATCTTTTCTGTGTCTTTTCTCTTTCTCCCCAGCGGCCTC
CCCTCTCTTTCTAACTCTGAATAGCTCCCTTGTTCCCCTCTGGGTTCCTGTCTTTCCCTC
TTATTCCAGTGTGTCCTTCCCACCTTTGTCTCTCCCTGTCTCAACCTCTGAATGCCTCTC
TGTCTGTCCTTGCAGAGGTGCGTCCTGCTTTGGCTGCCAGGCAGATATCCCAGAGAGGAC
GCAGTGAAAACAGGCAGGAATCTTTTTTTAAAAAAATTCACCAATGCTAAGAAAAAAAAT
GCTCAAAGGCCCCTTAGCCTTTGAATAAAGGCTGAAGAAAGCATTGTTTGTCAAGACCCA
AAGCAGAGTTCAAGAATGACTAGCAGAGATTTAGGGTGGCTCTGAGGAAGAACTGAAGCA
ATTGGGATCTGGCCACACATCTTCCCAGGAACACCAGAGATAGAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGTGTCTCTCTTTTCTCCCATCTTTTCTGTGTCTTTTCTCTTTCTCCCCAGCGGCCTC
CCCTCTCTTTCTAACTCTGAATAGCTCCCTTGTTCCCCTCTGGGTTCCTGTCTTTCCCTC
TTATTCCAGTGTGTCCTTCCCACCTTTGTCTCTCCCTGTCTCAACCTCTGAATGCCTCTC
TGTCTGTCCTTGCAGAGGTGCGTCCTGCTTTGGCTGCCAGGCAGATATCCCAGAGAGGAC
GCAGTGAAAACAGGCAGGAATCTTTTTTTAAAAAAATTCACCAATGCTAAGAAAAAAAAT
GCTCAAAGGCCCCTTAGCCTTTGAATAAAGGCTGAAGAAAGCATTGTTTGTCAAGACCCA
AAGCAGAGTTCAAGAATGACTAGCAGAGATTTAGGGTGGCTCTGAGGAAGAACTGAAGCA
ATTGGGATCTGGCCACACATCTTCCCAGGAACACCAGAGATAGAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-239, gnl|bosTau2|chr1 (53866306-53866079)
               

               
               5-239, gnl|Hg17|chr3 (185803182-185803411)
               

               
               5-239, gnl|Mm7|chr16 (20896363-20896583)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-239, gnl|bosTau2|chr1 (53866306-53866079)
               

               
               5-239, gnl|Hg17|chr3 (185803182-185803411)
               

               
               5-239, gnl|Mm7|chr16 (20896363-20896583)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	5-239, gnl\|bosTau2\|chr1 (53866306-53866079)
	5-239, gnl\|Hg17\|chr3 (185803182-185803411)
	5-239, gnl\|Mm7\|chr16 (20896363-20896583)