Non-Coding RNA Search

reru31c_g3.y1

Sequence:


               
               TCATCCCTGGCCTTCTCCCTGCAGCCAGCATCGCGCCAAAGGCAGCTGTGCCCCGCACAC
CTCCTCCACGCAGCCCCAATCCTTCCCCAGAGAGACCAAGGTCCGCCCTGGCTGCGGCCA
TTCTGGCAACAACGTTGACGGGCCGGACCGTTGGCATTCCTCAGCCTCGCCGCAGATCCC
ACTCCGAGAGTGACACGACCTACAATGAAAAGGACAGTTTCATCGAGCCCTATGCCACCA
CCTCGGAGCTGAGGCCTCTACCGCACTGGCAGAATGAGACAGGAAGATCTTCTTTGCCGT
CCTTTGAAATGCTGGGCTACGAGGACAAAGAGGACACTGACACACACCTGTCATCCAGCC
ACAAGGACGCCAGTGTTCCTAGAGAAGAGGAAGGTCTCAGCAGTGCCCTGTATGCCCTGC
CCCACAGAAATCAGATTCCATCGTCATATGGGACAGACAGTGAAGATGAGGCAAATATTT
CTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCATCCCTGGCCTTCTCCCTGCAGCCAGCATCGCGCCAAAGGCAGCTGTGCCCCGCACAC
CTCCTCCACGCAGCCCCAATCCTTCCCCAGAGAGACCAAGGTCCGCCCTGGCTGCGGCCA
TTCTGGCAACAACGTTGACGGGCCGGACCGTTGGCATTCCTCAGCCTCGCCGCAGATCCC
ACTCCGAGAGTGACACGACCTACAATGAAAAGGACAGTTTCATCGAGCCCTATGCCACCA
CCTCGGAGCTGAGGCCTCTACCGCACTGGCAGAATGAGACAGGAAGATCTTCTTTGCCGT
CCTTTGAAATGCTGGGCTACGAGGACAAAGAGGACACTGACACACACCTGTCATCCAGCC
ACAAGGACGCCAGTGTTCCTAGAGAAGAGGAAGGTCTCAGCAGTGCCCTGTATGCCCTGC
CCCACAGAAATCAGATTCCATCGTCATATGGGACAGACAGTGAAGATGAGGCAAATATTT
CTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61830270|ref|XP_606695.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61830270|ref|XP_606695.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               99-258, gnl|bosTau2|chr18 (36284218-36284059)
               

               
               99-258, gnl|Hg17|chr19 (38142806-38142647)
               

               
               99-258, gnl|Mm7|chr7 (32296034-32296193)
               


               
               260-434, gnl|bosTau2|chr18 (36279889-36279703)
               

               
               260-434, gnl|Hg17|chr19 (38136547-38136361)
               

               
               260-434, gnl|Mm7|chr7 (32298644-32298821)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               99-258, gnl|bosTau2|chr18 (36284218-36284059)
               

               
               99-258, gnl|Hg17|chr19 (38142806-38142647)
               

               
               99-258, gnl|Mm7|chr7 (32296034-32296193)
               


               
               260-434, gnl|bosTau2|chr18 (36279889-36279703)
               

               
               260-434, gnl|Hg17|chr19 (38136547-38136361)
               

               
               260-434, gnl|Mm7|chr7 (32298644-32298821)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	99-258, gnl\|bosTau2\|chr18 (36284218-36284059)
	99-258, gnl\|Hg17\|chr19 (38142806-38142647)
	99-258, gnl\|Mm7\|chr7 (32296034-32296193)

	260-434, gnl\|bosTau2\|chr18 (36279889-36279703)
	260-434, gnl\|Hg17\|chr19 (38136547-38136361)
	260-434, gnl\|Mm7\|chr7 (32298644-32298821)