Non-Coding RNA Search

reru33c_g5.y1

Sequence:


               
               CGGGGCCCGGCAGGCCTGCATGAAATCCATCGAGGTGAAGCATAACGGCCTCTCGGTGGA
GCTGCACAGAGACATGGAGGTGGTGGTGAATGGGAGACAGGTCTCTGTCCCTTACGTGGG
TGGGAACATGGAGGTCGGCATCTATGGCACCATCATGTATGAGGTCAGATTCAACCACCT
GGGCCACATCCTCACCTTCACCCCTCAAAACAACGAGTTCCAGCTGCAGCTGAGCCCCAA
GACCTTTGCCTCAAAGATGTACGGTCTCTGTGGGATCTGTGATGAGAATGGGGCCAATGA
CTTCATGCTGAGGGATGGCACAGTCACCACGGACTGGAAGACGATGGTCCAGGAGTGGGC
AGTGCAGCAGCCGGGCCAGATGTGCCAGCCGGTTCCCAAGGAGCAGTGTCCTGTCTCCGG
GGGCTACCAGTGCCAGGTCCTCCTCTCAGCGCTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGGCCCGGCAGGCCTGCATGAAATCCATCGAGGTGAAGCATAACGGCCTCTCGGTGGA
GCTGCACAGAGACATGGAGGTGGTGGTGAATGGGAGACAGGTCTCTGTCCCTTACGTGGG
TGGGAACATGGAGGTCGGCATCTATGGCACCATCATGTATGAGGTCAGATTCAACCACCT
GGGCCACATCCTCACCTTCACCCCTCAAAACAACGAGTTCCAGCTGCAGCTGAGCCCCAA
GACCTTTGCCTCAAAGATGTACGGTCTCTGTGGGATCTGTGATGAGAATGGGGCCAATGA
CTTCATGCTGAGGGATGGCACAGTCACCACGGACTGGAAGACGATGGTCCAGGAGTGGGC
AGTGCAGCAGCCGGGCCAGATGTGCCAGCCGGTTCCCAAGGAGCAGTGTCCTGTCTCCGG
GGGCTACCAGTGCCAGGTCCTCCTCTCAGCGCTGT

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

Help | Less info


               
               78-273, gnl|bosTau2|chr5 (61501764-61501575)
               

               
               78-273, gnl|canFam2|chr27 (41967853-41967605)
               

               
               78-273, gnl|danRer3|chr19 (18373988-18374212)
               

               
               78-273, gnl|fr1|chrUn (31113762-31113561)
               

               
               78-273, gnl|galGal2|chr1 (184941615-184941851)
               

               
               78-273, gnl|hg17|chr12 (5973834-5974083)
               

               
               78-273, gnl|Hg17|chr12 (5974036-5973841)
               

               
               78-273, gnl|loxAfr1|scaffold_34471 (1126-874)
               

               
               78-273, gnl|mm7|chr6 (125679613-125679374)
               

               
               78-273, gnl|Mm7|chr6 (125679409-125679604)
               

               
               78-273, gnl|monDom2|scaffold_31 (14270216-14270435)
               

               
               78-273, gnl|oryCun1|scaffold_211414 (73628-73877)
               

               
               78-273, gnl|panTro1|chr10 (6482147-6482396)
               

               
               78-273, gnl|rheMac2|chr11 (6108423-6108672)
               

               
               78-273, gnl|rn3|chr4 (162068023-162067784)
               

               
               78-273, gnl|xenTro1|scaffold_10 (1812479-1812683)

Aligned organism(s): 16 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               78-273, gnl|bosTau2|chr5 (61501764-61501575)
               

               
               78-273, gnl|canFam2|chr27 (41967853-41967605)
               

               
               78-273, gnl|danRer3|chr19 (18373988-18374212)
               

               
               78-273, gnl|fr1|chrUn (31113762-31113561)
               

               
               78-273, gnl|galGal2|chr1 (184941615-184941851)
               

               
               78-273, gnl|hg17|chr12 (5973834-5974083)
               

               
               78-273, gnl|Hg17|chr12 (5974036-5973841)
               

               
               78-273, gnl|loxAfr1|scaffold_34471 (1126-874)
               

               
               78-273, gnl|mm7|chr6 (125679613-125679374)
               

               
               78-273, gnl|Mm7|chr6 (125679409-125679604)
               

               
               78-273, gnl|monDom2|scaffold_31 (14270216-14270435)
               

               
               78-273, gnl|oryCun1|scaffold_211414 (73628-73877)
               

               
               78-273, gnl|panTro1|chr10 (6482147-6482396)
               

               
               78-273, gnl|rheMac2|chr11 (6108423-6108672)
               

               
               78-273, gnl|rn3|chr4 (162068023-162067784)
               

               
               78-273, gnl|xenTro1|scaffold_10 (1812479-1812683)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eru (0.120048)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	78-273, gnl\|bosTau2\|chr5 (61501764-61501575)
	78-273, gnl\|canFam2\|chr27 (41967853-41967605)
	78-273, gnl\|danRer3\|chr19 (18373988-18374212)
	78-273, gnl\|fr1\|chrUn (31113762-31113561)
	78-273, gnl\|galGal2\|chr1 (184941615-184941851)
	78-273, gnl\|hg17\|chr12 (5973834-5974083)
	78-273, gnl\|Hg17\|chr12 (5974036-5973841)
	78-273, gnl\|loxAfr1\|scaffold_34471 (1126-874)
	78-273, gnl\|mm7\|chr6 (125679613-125679374)
	78-273, gnl\|Mm7\|chr6 (125679409-125679604)
	78-273, gnl\|monDom2\|scaffold_31 (14270216-14270435)
	78-273, gnl\|oryCun1\|scaffold_211414 (73628-73877)
	78-273, gnl\|panTro1\|chr10 (6482147-6482396)
	78-273, gnl\|rheMac2\|chr11 (6108423-6108672)
	78-273, gnl\|rn3\|chr4 (162068023-162067784)
	78-273, gnl\|xenTro1\|scaffold_10 (1812479-1812683)