Non-Coding RNA Search

rese09c_b13.y1

Sequence:


               
               GGAGCCGCGCCTCCGTTTTTCAGATGTTCACTTGAACTCTCGGAACACGTTCGAGGTGAG
CCGCCTCCAGAGTGCCCGCGACCATCTGCCTTCGGCGGTGCCGCGGGTGCCCTCGCCTGC
GGCGGAGCAGGGCCCCGCGGGGACCTCGGCGCGGGCTCGACGGAGCGGCGGCTTCGCCGA
CTTCTTCGCCAGAAATCTTTTTCCAAAAAGGGCAAAGGAACTCAAATCAGTTGTACATAG
TGCTCCTGGTTGGAAATTATTGGGTAAAGTCCCTCCCAGAGAGAATCTTCAGAAAACTTC
CAAAATCATTCAGCAGGAATATGAAGCACGAACAGGGAGAACCTGTAAACCACCCCCTCA
GTGTTCTAGACGAAAGAATTTGGAATTTGAGCCCCTTTCTACTACTGCCCTGATTCTTGA
GGATCGACCATCAAATCTACCTGCCAAATCTATGGAAGAAGCTTTACGTCACCGACAAGA
ATATGATGAGATGGTGGCTGAGGCTAAAAAACGAGAAATTAAAGAAGCACATAAAAGAAA
AAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGCCGCGCCTCCGTTTTTCAGATGTTCACTTGAACTCTCGGAACACGTTCGAGGTGAG
CCGCCTCCAGAGTGCCCGCGACCATCTGCCTTCGGCGGTGCCGCGGGTGCCCTCGCCTGC
GGCGGAGCAGGGCCCCGCGGGGACCTCGGCGCGGGCTCGACGGAGCGGCGGCTTCGCCGA
CTTCTTCGCCAGAAATCTTTTTCCAAAAAGGGCAAAGGAACTCAAATCAGTTGTACATAG
TGCTCCTGGTTGGAAATTATTGGGTAAAGTCCCTCCCAGAGAGAATCTTCAGAAAACTTC
CAAAATCATTCAGCAGGAATATGAAGCACGAACAGGGAGAACCTGTAAACCACCCCCTCA
GTGTTCTAGACGAAAGAATTTGGAATTTGAGCCCCTTTCTACTACTGCCCTGATTCTTGA
GGATCGACCATCAAATCTACCTGCCAAATCTATGGAAGAAGCTTTACGTCACCGACAAGA
ATATGATGAGATGGTGGCTGAGGCTAAAAAACGAGAAATTAAAGAAGCACATAAAAGAAA
AAAAAAAAAAAAAAA

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               2-192, gnl|bosTau2|chr18 (24537894-24538084)
               

               
               2-192, gnl|canFam2|chr28 (11543606-11544069)
               

               
               2-192, gnl|hg17|chr10 (96152812-96153278)
               

               
               2-192, gnl|Hg17|chr10 (96153141-96153331)
               

               
               2-192, gnl|mm7|chr19 (38537743-38538077)
               

               
               2-192, gnl|Mm7|chr19 (38537945-38538130)
               

               
               2-192, gnl|monDom2|scaffold_14 (28170646-28170189)
               

               
               2-192, gnl|panTro1|chr8 (97908983-97909449)
               

               
               2-192, gnl|rheMac2|chr9 (93860127-93860593)
               

               
               2-192, gnl|rn3|chr1 (243253059-243253393)
               

               
               2-192, gnl|xenTro1|scaffold_3402 (13411-13034)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-192, gnl|bosTau2|chr18 (24537894-24538084)
               

               
               2-192, gnl|canFam2|chr28 (11543606-11544069)
               

               
               2-192, gnl|hg17|chr10 (96152812-96153278)
               

               
               2-192, gnl|Hg17|chr10 (96153141-96153331)
               

               
               2-192, gnl|mm7|chr19 (38537743-38538077)
               

               
               2-192, gnl|Mm7|chr19 (38537945-38538130)
               

               
               2-192, gnl|monDom2|scaffold_14 (28170646-28170189)
               

               
               2-192, gnl|panTro1|chr8 (97908983-97909449)
               

               
               2-192, gnl|rheMac2|chr9 (93860127-93860593)
               

               
               2-192, gnl|rn3|chr1 (243253059-243253393)
               

               
               2-192, gnl|xenTro1|scaffold_3402 (13411-13034)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	2-192, gnl\|bosTau2\|chr18 (24537894-24538084)
	2-192, gnl\|canFam2\|chr28 (11543606-11544069)
	2-192, gnl\|hg17\|chr10 (96152812-96153278)
	2-192, gnl\|Hg17\|chr10 (96153141-96153331)
	2-192, gnl\|mm7\|chr19 (38537743-38538077)
	2-192, gnl\|Mm7\|chr19 (38537945-38538130)
	2-192, gnl\|monDom2\|scaffold_14 (28170646-28170189)
	2-192, gnl\|panTro1\|chr8 (97908983-97909449)
	2-192, gnl\|rheMac2\|chr9 (93860127-93860593)
	2-192, gnl\|rn3\|chr1 (243253059-243253393)
	2-192, gnl\|xenTro1\|scaffold_3402 (13411-13034)