Non-Coding RNA Search

rese11c_j17.y1

Sequence:


               
               GAGTCTTCATCTGAGGACTCCAGCACAGCAGAAAACTTCTCAGACAATGAGAGCACAGAG
AACGAGGCCCTGGAGCGGGAGGAGAGGGTTGCAAGTGTGGCTGAAGCCCCCCAGCTCAGG
TCCAAGGAGACAGCAAAGGCCAAGACCAGCCGGGAGGAGTACCAGCTGTCCCAGGAGTCT
CAGCACGTGCCTACAGCTGAGGGAGCATTGGGATCAACTGCTGAAGAGGAGATCCGGATG
GAGCTCAGCCCTGACCTCATCTCAGCCTGCCTAGCCCTGGAGAAGTACCTGGACAACCCC
AACGCCCTCACGGAGCGGGAGCTGAAAGTGGCCTATACCACGGTGCTGCAGGAGTGGCTG
CGCCTGGCCTGCCGCAGCGACGCCCACCCAGAGCTTGTGCGGCGCCACCTGGTCACCTTC
CGGGCCATGTCGGCCCGGCTGCTGGACTACGTGGTCAATATCGCTGACAGCAACGGCAAC
ACCGCACTGCACTACTCCGTGTCCCACGCCAACTTCCCCGTGGTGCGGCAGCTGCTGGAC
AGTGGTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGTCTTCATCTGAGGACTCCAGCACAGCAGAAAACTTCTCAGACAATGAGAGCACAGAG
AACGAGGCCCTGGAGCGGGAGGAGAGGGTTGCAAGTGTGGCTGAAGCCCCCCAGCTCAGG
TCCAAGGAGACAGCAAAGGCCAAGACCAGCCGGGAGGAGTACCAGCTGTCCCAGGAGTCT
CAGCACGTGCCTACAGCTGAGGGAGCATTGGGATCAACTGCTGAAGAGGAGATCCGGATG
GAGCTCAGCCCTGACCTCATCTCAGCCTGCCTAGCCCTGGAGAAGTACCTGGACAACCCC
AACGCCCTCACGGAGCGGGAGCTGAAAGTGGCCTATACCACGGTGCTGCAGGAGTGGCTG
CGCCTGGCCTGCCGCAGCGACGCCCACCCAGAGCTTGTGCGGCGCCACCTGGTCACCTTC
CGGGCCATGTCGGCCCGGCTGCTGGACTACGTGGTCAATATCGCTGACAGCAACGGCAAC
ACCGCACTGCACTACTCCGTGTCCCACGCCAACTTCCCCGTGGTGCGGCAGCTGCTGGAC
AGTGGTGT

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-237, gnl|bosTau2|chr7 (11070025-11069789)
               

               
               1-237, gnl|Hg17|chr19 (11148489-11148253)
               

               
               1-237, gnl|Mm7|chr9 (21661509-21661276)
               


               
               311-547, gnl|bosTau2|chr7 (11068546-11068310)
               

               
               311-547, gnl|Hg17|chr19 (11146382-11146146)
               

               
               311-547, gnl|Mm7|chr9 (21656339-21656106)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-237, gnl|bosTau2|chr7 (11070025-11069789)
               

               
               1-237, gnl|Hg17|chr19 (11148489-11148253)
               

               
               1-237, gnl|Mm7|chr9 (21661509-21661276)
               


               
               311-547, gnl|bosTau2|chr7 (11068546-11068310)
               

               
               311-547, gnl|Hg17|chr19 (11146382-11146146)
               

               
               311-547, gnl|Mm7|chr9 (21656339-21656106)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	1-237, gnl\|bosTau2\|chr7 (11070025-11069789)
	1-237, gnl\|Hg17\|chr19 (11148489-11148253)
	1-237, gnl\|Mm7\|chr9 (21661509-21661276)

	311-547, gnl\|bosTau2\|chr7 (11068546-11068310)
	311-547, gnl\|Hg17\|chr19 (11146382-11146146)
	311-547, gnl\|Mm7\|chr9 (21656339-21656106)