Non-Coding RNA Search

rese17c_i9.y1

Sequence:


               
               GGGCTTTGTCTGTATCCTTTATTTTCCTGGCTTCAAGGCAGCTAGGCAATAGGCCACCCA
GCACCCAAGCCACCCCAGTACCTCTGAAGGGTATTTACTGCTGGTCTCTATACAAACCAG
CCCTTGGTATCTGTACACGTGAACACCCAGCTGCCATGTTAGGAAATTCAACTGCATACC
CAAGAGTGTAAGGAAATGCTTTTGTGCAGAATATATTTCTTTCAGGCATTGTCAGGTAAT
GTGGTTTTGTTTAAGCTATAAAATTAACTCACCCCTGAAATAAAGGGGGAAGATGATGCC
CAGCCAAGCACAGCCTGACTCATAGGGGTGAATACGTCCAGCCTCCCCCACCCAACCGAA
GGCTGAGGGTTCCACTTGCAGACTCTTCAGGGGGCTGTGAGTCCCAGTGTTTCCCTGGGC
CCTGGGTGTGGGTTTTAGAAAACTGTCTTTTTGATATCATGGCCCAACCATGTGAGAAGT
ATTCAGGCTCCTCTTTCCCCATTAGTCTGAGAAAAAGGAAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGCTTTGTCTGTATCCTTTATTTTCCTGGCTTCAAGGCAGCTAGGCAATAGGCCACCCA
GCACCCAAGCCACCCCAGTACCTCTGAAGGGTATTTACTGCTGGTCTCTATACAAACCAG
CCCTTGGTATCTGTACACGTGAACACCCAGCTGCCATGTTAGGAAATTCAACTGCATACC
CAAGAGTGTAAGGAAATGCTTTTGTGCAGAATATATTTCTTTCAGGCATTGTCAGGTAAT
GTGGTTTTGTTTAAGCTATAAAATTAACTCACCCCTGAAATAAAGGGGGAAGATGATGCC
CAGCCAAGCACAGCCTGACTCATAGGGGTGAATACGTCCAGCCTCCCCCACCCAACCGAA
GGCTGAGGGTTCCACTTGCAGACTCTTCAGGGGGCTGTGAGTCCCAGTGTTTCCCTGGGC
CCTGGGTGTGGGTTTTAGAAAACTGTCTTTTTGATATCATGGCCCAACCATGTGAGAAGT
ATTCAGGCTCCTCTTTCCCCATTAGTCTGAGAAAAAGGAAAAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               329-444, - strand, RNAz p=0.996043

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               329-444, - strand, RNAz p=0.996043

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-521, gnl|bosTau2|chr11 (73117924-73118462)
               

               
               1-521, gnl|Hg17|chr9 (124653767-124654622)
               

               
               1-521, gnl|Mm7|chr2 (38968937-38969423)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-521, gnl|bosTau2|chr11 (73117924-73118462)
               

               
               1-521, gnl|Hg17|chr9 (124653767-124654622)
               

               
               1-521, gnl|Mm7|chr2 (38968937-38969423)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ese (0.126502)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	1-521, gnl\|bosTau2\|chr11 (73117924-73118462)
	1-521, gnl\|Hg17\|chr9 (124653767-124654622)
	1-521, gnl\|Mm7\|chr2 (38968937-38969423)