rese26c_b7.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGATTATAACAACATAGGAAAATTCTTAAATAGAATTTTGGGCATGGAAGTGCATCAAC AGAATGCATTATTTCAGTATTTTGCAGATACGCTTACTGCAGTTGTTCAAAATGCCAAAA AAAATGGAAGATATGATATGGGAATCTTAGATCTTGGTTCTGGAGATGAAAAAGTGAGGA AAAGTGACGTTAAGAAGTTTTTGACTCCAGGATATTCAACCTCTGGCCACGTAGAATTAT ACACAATAAGTGTAGAGAGGGGAATGTCCTGGGAGGAAGCTACCAAGATTTGGGCTGAGC TGACAGGACCAGATGATGGCTTTTATTTGTCATTGCAAATAAGAAACAACAAGAAAACTG CCATCTTAGTCAAAGAAGTGAATCCTAAAAAGAAGCTTTTCTTAGTTTATAGACCAAATA CTGGGAAACAGCTCAAATTAGAAATTTATGCTGATCTAAAGAAGAAATATAAGAAGGTAG TGTCAGATGATGCCCTGGTCCACTGGTTAGATCAGTATAATTCATCTGCAGATACTTGTA CTCATGCTTATTGGCGTGGTAATTGCAAAAAAGCAAGCTTGGGATTAGTTTGTGAAATTG GTCTTCGGTGCCGCACATACTATGTATTATGTGGCTCCGTACTGAGTGTCTGGACGAAAG T |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGATTATAACAACATAGGAAAATTCTTAAATAGAATTTTGGGCATGGAAGTGCATCAAC AGAATGCATTATTTCAGTATTTTGCAGATACGCTTACTGCAGTTGTTCAAAATGCCAAAA AAAATGGAAGATATGATATGGGAATCTTAGATCTTGGTTCTGGAGATGAAAAAGTGAGGA AAAGTGACGTTAAGAAGTTTTTGACTCCAGGATATTCAACCTCTGGCCACGTAGAATTAT ACACAATAAGTGTAGAGAGGGGAATGTCCTGGGAGGAAGCTACCAAGATTTGGGCTGAGC TGACAGGACCAGATGATGGCTTTTATTTGTCATTGCAAATAAGAAACAACAAGAAAACTG CCATCTTAGTCAAAGAAGTGAATCCTAAAAAGAAGCTTTTCTTAGTTTATAGACCAAATA CTGGGAAACAGCTCAAATTAGAAATTTATGCTGATCTAAAGAAGAAATATAAGAAGGTAG TGTCAGATGATGCCCTGGTCCACTGGTTAGATCAGTATAATTCATCTGCAGATACTTGTA CTCATGCTTATTGGCGTGGTAATTGCAAAAAAGCAAGCTTGGGATTAGTTTGTGAAATTG GTCTTCGGTGCCGCACATACTATGTATTATGTGGCTCCGTACTGAGTGTCTGGACGAAAG T |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 2-121, + strand, RNAz p=0.967251 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 2-121, + strand, RNAz p=0.967251 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of BC058837, + |
| Aligned organism(s): 55 entry(ies) | More info |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
| 2-150, gnl|bosTau2|chr17 (26369676-26369528) | |
| 2-150, gnl|canFam2|chr26 (9270476-9270296) | |
| 2-150, gnl|danRer3|chrNA (39163237-39163405) | |
| 2-150, gnl|dasNov1|scaffold_139090 (1643-1823) | |
| 2-150, gnl|echTel1|scaffold_317122 (42784-42607) | |
| 2-150, gnl|fr1|chrUn (35850090-35849926) | |
| 2-150, gnl|galGal2|chr15 (4989620-4989446) | |
| 2-150, gnl|hg17|chr12 (122319130-122319304) | |
| 2-150, gnl|Hg17|chr12 (122319285-122319137) | |
| 2-150, gnl|loxAfr1|scaffold_16655 (35983-36163) | |
| 2-150, gnl|mm7|chr5 (123627715-123627895) | |
| 2-150, gnl|Mm7|chr5 (123627870-123627722) | |
| 2-150, gnl|monDom2|scaffold_97 (3829715-3829893) | |
| 2-150, gnl|panTro1|chr10 (125395469-125395643) | |
| 2-150, gnl|rheMac2|chr11 (124579488-124579662) | |
| 2-150, gnl|rn3|chr12 (33201244-33201064) | |
| 2-150, gnl|tetNig1|chrUn_random (1260595-1260438) | |
| 2-150, gnl|xenTro1|scaffold_100 (2086165-2086328) | |
| 339-479, gnl|bosTau2|chr17 (26363386-26363246) | |
| 339-479, gnl|canFam2|chr26 (9275575-9275413) | |
| 339-479, gnl|danRer3|chrNA (187252416-187252273) | |
| 339-479, gnl|dasNov1|scaffold_2520 (111037-111193) | |
| 339-479, gnl|echTel1|scaffold_317122 (45871-45715) | |
| 339-479, gnl|fr1|chrUn (35850697-35850546) | |
| 339-479, gnl|galGal2|chr15 (4990692-4990538) | |
| 339-479, gnl|hg17|chr12 (122314007-122314163) | |
| 339-479, gnl|Hg17|chr12 (122314146-122314006) | |
| 339-479, gnl|loxAfr1|scaffold_16655 (32898-33058) | |
| 339-479, gnl|mm7|chr5 (123625146-123625299) | |
| 339-479, gnl|Mm7|chr5 (123625285-123625145) | |
| 339-479, gnl|monDom2|scaffold_97 (3827298-3827452) | |
| 339-479, gnl|oryCun1|scaffold_141346 (17772-17924) | |
| 339-479, gnl|panTro1|chr10 (125387889-125388045) | |
| 339-479, gnl|rheMac2|chr11 (124574458-124574614) | |
| 339-479, gnl|rn3|chr12 (33203591-33203438) | |
| 339-479, gnl|tetNig1|chrUn_random (1261236-1261084) | |
| 339-479, gnl|xenTro1|scaffold_100 (2084020-2084176) | |
| 553-661, gnl|bosTau2|chr17 (26361473-26361365) | |
| 553-661, gnl|canFam2|chr26 (9277850-9277614) | |
| 553-661, gnl|danRer3|chrNA (39161705-39161933) | |
| 553-661, gnl|dasNov1|scaffold_2520 (108250-108496) | |
| 553-661, gnl|echTel1|scaffold_317122 (47538-47294) | |
| 553-661, gnl|fr1|chrUn (35851221-35850998) | |
| 553-661, gnl|galGal2|chr15 (4991776-4991552) | |
| 553-661, gnl|hg17|chr12 (122307379-122307625) | |
| 553-661, gnl|Hg17|chr12 (122307599-122307491) | |
| 553-661, gnl|loxAfr1|scaffold_16655 (30224-30473) | |
| 553-661, gnl|mm7|chr5 (123621946-123622182) | |
| 553-661, gnl|Mm7|chr5 (123622155-123622047) | |
| 553-661, gnl|monDom2|scaffold_97 (3825171-3825423) | |
| 553-661, gnl|oryCun1|scaffold_141346 (14858-15103) | |
| 553-661, gnl|panTro1|chr10 (125381079-125381325) | |
| 553-661, gnl|rn3|chr12 (33206352-33206106) | |
| 553-661, gnl|tetNig1|chrUn_random (1261790-1261569) | |
| 553-661, gnl|xenTro1|scaffold_100 (2083204-2083448) |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-150, gnl|bosTau2|chr17 (26369676-26369528) | |
| 2-150, gnl|canFam2|chr26 (9270476-9270296) | |
| 2-150, gnl|danRer3|chrNA (39163237-39163405) | |
| 2-150, gnl|dasNov1|scaffold_139090 (1643-1823) | |
| 2-150, gnl|echTel1|scaffold_317122 (42784-42607) | |
| 2-150, gnl|fr1|chrUn (35850090-35849926) | |
| 2-150, gnl|galGal2|chr15 (4989620-4989446) | |
| 2-150, gnl|hg17|chr12 (122319130-122319304) | |
| 2-150, gnl|Hg17|chr12 (122319285-122319137) | |
| 2-150, gnl|loxAfr1|scaffold_16655 (35983-36163) | |
| 2-150, gnl|mm7|chr5 (123627715-123627895) | |
| 2-150, gnl|Mm7|chr5 (123627870-123627722) | |
| 2-150, gnl|monDom2|scaffold_97 (3829715-3829893) | |
| 2-150, gnl|panTro1|chr10 (125395469-125395643) | |
| 2-150, gnl|rheMac2|chr11 (124579488-124579662) | |
| 2-150, gnl|rn3|chr12 (33201244-33201064) | |
| 2-150, gnl|tetNig1|chrUn_random (1260595-1260438) | |
| 2-150, gnl|xenTro1|scaffold_100 (2086165-2086328) | |
| 339-479, gnl|bosTau2|chr17 (26363386-26363246) | |
| 339-479, gnl|canFam2|chr26 (9275575-9275413) | |
| 339-479, gnl|danRer3|chrNA (187252416-187252273) | |
| 339-479, gnl|dasNov1|scaffold_2520 (111037-111193) | |
| 339-479, gnl|echTel1|scaffold_317122 (45871-45715) | |
| 339-479, gnl|fr1|chrUn (35850697-35850546) | |
| 339-479, gnl|galGal2|chr15 (4990692-4990538) | |
| 339-479, gnl|hg17|chr12 (122314007-122314163) | |
| 339-479, gnl|Hg17|chr12 (122314146-122314006) | |
| 339-479, gnl|loxAfr1|scaffold_16655 (32898-33058) | |
| 339-479, gnl|mm7|chr5 (123625146-123625299) | |
| 339-479, gnl|Mm7|chr5 (123625285-123625145) | |
| 339-479, gnl|monDom2|scaffold_97 (3827298-3827452) | |
| 339-479, gnl|oryCun1|scaffold_141346 (17772-17924) | |
| 339-479, gnl|panTro1|chr10 (125387889-125388045) | |
| 339-479, gnl|rheMac2|chr11 (124574458-124574614) | |
| 339-479, gnl|rn3|chr12 (33203591-33203438) | |
| 339-479, gnl|tetNig1|chrUn_random (1261236-1261084) | |
| 339-479, gnl|xenTro1|scaffold_100 (2084020-2084176) | |
| 553-661, gnl|bosTau2|chr17 (26361473-26361365) | |
| 553-661, gnl|canFam2|chr26 (9277850-9277614) | |
| 553-661, gnl|danRer3|chrNA (39161705-39161933) | |
| 553-661, gnl|dasNov1|scaffold_2520 (108250-108496) | |
| 553-661, gnl|echTel1|scaffold_317122 (47538-47294) | |
| 553-661, gnl|fr1|chrUn (35851221-35850998) | |
| 553-661, gnl|galGal2|chr15 (4991776-4991552) | |
| 553-661, gnl|hg17|chr12 (122307379-122307625) | |
| 553-661, gnl|Hg17|chr12 (122307599-122307491) | |
| 553-661, gnl|loxAfr1|scaffold_16655 (30224-30473) | |
| 553-661, gnl|mm7|chr5 (123621946-123622182) | |
| 553-661, gnl|Mm7|chr5 (123622155-123622047) | |
| 553-661, gnl|monDom2|scaffold_97 (3825171-3825423) | |
| 553-661, gnl|oryCun1|scaffold_141346 (14858-15103) | |
| 553-661, gnl|panTro1|chr10 (125381079-125381325) | |
| 553-661, gnl|rn3|chr12 (33206352-33206106) | |
| 553-661, gnl|tetNig1|chrUn_random (1261790-1261569) | |
| 553-661, gnl|xenTro1|scaffold_100 (2083204-2083448) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.126502) |