Non-Coding RNA Search

rese28c_h4.y1

Sequence:


               
               ATCGCCTTGGCAGTCACTGACCATGCCCGCTCCGCTGCTCCCGCTGCTGCTGCGAACGCT
GCTGGCCCGCCTGCTGCTGCCCGCTGCCCGCCTGGCCCGTCGGCACCTCCTGCCTCTGCT
GCGCCGGCTGGCCCGCCGCCTGGGCTCCCAGGATATGCGAGAGGCTTTACTGGGCTGTCT
GGTGTTCCTCCTCAGCCAGAGACACCCGCCAGATGATGCCGCTGCTGCCGGGGAGGCCTC
CAGAGTGGCCCGCCTGGAGAGGAGGGAGAGGATAGTTTCTCAAAAATGAGGCTGCGAATC
CCAGCAGTAGCTGTATTCATTGAAATGCTTTCTTTTGGAGTAAGACAGCCTTGGCCCCTT
CACTGACCGCAGCCTGCCCAGTGGGCAGAAGACATGGTGGGGGCACTGAGCCTGAGAGGG
GTCTAGCCCAGACGTGCCTCCTCTCTCCCAGCAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCGCCTTGGCAGTCACTGACCATGCCCGCTCCGCTGCTCCCGCTGCTGCTGCGAACGCT
GCTGGCCCGCCTGCTGCTGCCCGCTGCCCGCCTGGCCCGTCGGCACCTCCTGCCTCTGCT
GCGCCGGCTGGCCCGCCGCCTGGGCTCCCAGGATATGCGAGAGGCTTTACTGGGCTGTCT
GGTGTTCCTCCTCAGCCAGAGACACCCGCCAGATGATGCCGCTGCTGCCGGGGAGGCCTC
CAGAGTGGCCCGCCTGGAGAGGAGGGAGAGGATAGTTTCTCAAAAATGAGGCTGCGAATC
CCAGCAGTAGCTGTATTCATTGAAATGCTTTCTTTTGGAGTAAGACAGCCTTGGCCCCTT
CACTGACCGCAGCCTGCCCAGTGGGCAGAAGACATGGTGGGGGCACTGAGCCTGAGAGGG
GTCTAGCCCAGACGTGCCTCCTCTCTCCCAGCAGAA

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               1-456, gnl|bosTau2|chr23 (17589680-17589238)
               

               
               1-456, gnl|canFam2|chr12 (15632505-15632863)
               

               
               1-456, gnl|dasNov1|scaffold_97596 (5392-5738)
               

               
               1-456, gnl|echTel1|scaffold_297244 (37452-37820)
               

               
               1-456, gnl|hg17|chr6 (44293097-44293471)
               

               
               1-456, gnl|Hg17|chr6 (44293152-44293605)
               

               
               1-456, gnl|loxAfr1|scaffold_61218 (9666-9298)
               

               
               1-456, gnl|mm7|chr17 (43731163-43730793)
               

               
               1-456, gnl|Mm7|chr17 (43731102-43730641)
               

               
               1-456, gnl|monDom2|scaffold_0 (196618883-196618438)
               

               
               1-456, gnl|oryCun1|scaffold_200653 (55273-54902)
               

               
               1-456, gnl|panTro1|chr5 (44900630-44901004)
               

               
               1-456, gnl|rheMac2|chr4 (44136081-44136455)
               

               
               1-456, gnl|rn3|chr9 (10995233-10995601)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-456, gnl|bosTau2|chr23 (17589680-17589238)
               

               
               1-456, gnl|canFam2|chr12 (15632505-15632863)
               

               
               1-456, gnl|dasNov1|scaffold_97596 (5392-5738)
               

               
               1-456, gnl|echTel1|scaffold_297244 (37452-37820)
               

               
               1-456, gnl|hg17|chr6 (44293097-44293471)
               

               
               1-456, gnl|Hg17|chr6 (44293152-44293605)
               

               
               1-456, gnl|loxAfr1|scaffold_61218 (9666-9298)
               

               
               1-456, gnl|mm7|chr17 (43731163-43730793)
               

               
               1-456, gnl|Mm7|chr17 (43731102-43730641)
               

               
               1-456, gnl|monDom2|scaffold_0 (196618883-196618438)
               

               
               1-456, gnl|oryCun1|scaffold_200653 (55273-54902)
               

               
               1-456, gnl|panTro1|chr5 (44900630-44901004)
               

               
               1-456, gnl|rheMac2|chr4 (44136081-44136455)
               

               
               1-456, gnl|rn3|chr9 (10995233-10995601)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ese (0.126502)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	1-456, gnl\|bosTau2\|chr23 (17589680-17589238)
	1-456, gnl\|canFam2\|chr12 (15632505-15632863)
	1-456, gnl\|dasNov1\|scaffold_97596 (5392-5738)
	1-456, gnl\|echTel1\|scaffold_297244 (37452-37820)
	1-456, gnl\|hg17\|chr6 (44293097-44293471)
	1-456, gnl\|Hg17\|chr6 (44293152-44293605)
	1-456, gnl\|loxAfr1\|scaffold_61218 (9666-9298)
	1-456, gnl\|mm7\|chr17 (43731163-43730793)
	1-456, gnl\|Mm7\|chr17 (43731102-43730641)
	1-456, gnl\|monDom2\|scaffold_0 (196618883-196618438)
	1-456, gnl\|oryCun1\|scaffold_200653 (55273-54902)
	1-456, gnl\|panTro1\|chr5 (44900630-44901004)
	1-456, gnl\|rheMac2\|chr4 (44136081-44136455)
	1-456, gnl\|rn3\|chr9 (10995233-10995601)