Non-Coding RNA Search

rese30c_i2.y1

Sequence:


               
               AAAAAAAGAAAAAAAAAAACTCGACAAAGCTTCTAGCCCCTGCCTCTGCCAAGCTCTCGG
GCCTCCTGATCCCCCTTGTCCTTTCTATGACCTGCTCCCCTTGGCTTCCAGGCATCTGCA
TGTGCTGTTCCCTCTGCTGGGCTCACCCTTCCCACATTTTTTCTTTGCGCTGGTTGAAGC
TGATTTGAGCCTCAGGATTCAGGCCAATAGCCCTATCTCTGCAGAGCGTCTTTTTTTTTT
TTTTTTTTTTTAACAACCGCAGCGCGGGGTGGGCATTATACTTCCTGGGTATTATACTTA
TTCAATCAGGAACCTGTGTCTGCCTCAACTACCACCCCACCCCCCGCGATGCATGCTGTT
TTAAACAGTGGTCAGTGACCACTCAAAAGGGTCTGGGACAGAAGGACCGGCCACCCGCTG
CCCCCCCCACTTCCTCCTTGGTCTCCAGAGTCAAAAGTACCATCATTCATCTTTCAGAGG
AAGCTTTTGGAGCCGAGCCAGTTTTTATGAACACAAATAAATGATTGGGGCACAGAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAAAGAAAAAAAAAAACTCGACAAAGCTTCTAGCCCCTGCCTCTGCCAAGCTCTCGG
GCCTCCTGATCCCCCTTGTCCTTTCTATGACCTGCTCCCCTTGGCTTCCAGGCATCTGCA
TGTGCTGTTCCCTCTGCTGGGCTCACCCTTCCCACATTTTTTCTTTGCGCTGGTTGAAGC
TGATTTGAGCCTCAGGATTCAGGCCAATAGCCCTATCTCTGCAGAGCGTCTTTTTTTTTT
TTTTTTTTTTTAACAACCGCAGCGCGGGGTGGGCATTATACTTCCTGGGTATTATACTTA
TTCAATCAGGAACCTGTGTCTGCCTCAACTACCACCCCACCCCCCGCGATGCATGCTGTT
TTAAACAGTGGTCAGTGACCACTCAAAAGGGTCTGGGACAGAAGGACCGGCCACCCGCTG
CCCCCCCCACTTCCTCCTTGGTCTCCAGAGTCAAAAGTACCATCATTCATCTTTCAGAGG
AAGCTTTTGGAGCCGAGCCAGTTTTTATGAACACAAATAAATGATTGGGGCACAGAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               86-233, gnl|bosTau2|chr19 (38116672-38116526)
               

               
               86-233, gnl|canFam2|chr9 (22537443-22537273)
               

               
               86-233, gnl|dasNov1|scaffold_64026 (1480-1323)
               

               
               86-233, gnl|hg17|chr17 (39614778-39614939)
               

               
               86-233, gnl|Hg17|chr17 (39614784-39614923)
               

               
               86-233, gnl|loxAfr1|scaffold_41331 (7374-7213)
               

               
               86-233, gnl|mm7|chr11 (102388179-102388249)
               

               
               86-233, gnl|Mm7|chr11 (102387776-102387943)
               

               
               86-233, gnl|panTro1|chr19 (42802611-42802772)
               

               
               86-233, gnl|rheMac2|chr16 (54271517-54271677)
               

               
               86-233, gnl|rn3|chr10 (91374766-91374909)
               


               
               335-541, gnl|bosTau2|chr19 (38116358-38116145)
               

               
               335-541, gnl|Hg17|chr17 (39615059-39615261)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               86-233, gnl|bosTau2|chr19 (38116672-38116526)
               

               
               86-233, gnl|canFam2|chr9 (22537443-22537273)
               

               
               86-233, gnl|dasNov1|scaffold_64026 (1480-1323)
               

               
               86-233, gnl|hg17|chr17 (39614778-39614939)
               

               
               86-233, gnl|Hg17|chr17 (39614784-39614923)
               

               
               86-233, gnl|loxAfr1|scaffold_41331 (7374-7213)
               

               
               86-233, gnl|mm7|chr11 (102388179-102388249)
               

               
               86-233, gnl|Mm7|chr11 (102387776-102387943)
               

               
               86-233, gnl|panTro1|chr19 (42802611-42802772)
               

               
               86-233, gnl|rheMac2|chr16 (54271517-54271677)
               

               
               86-233, gnl|rn3|chr10 (91374766-91374909)
               


               
               335-541, gnl|bosTau2|chr19 (38116358-38116145)
               

               
               335-541, gnl|Hg17|chr17 (39615059-39615261)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ese (0.126502)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	86-233, gnl\|bosTau2\|chr19 (38116672-38116526)
	86-233, gnl\|canFam2\|chr9 (22537443-22537273)
	86-233, gnl\|dasNov1\|scaffold_64026 (1480-1323)
	86-233, gnl\|hg17\|chr17 (39614778-39614939)
	86-233, gnl\|Hg17\|chr17 (39614784-39614923)
	86-233, gnl\|loxAfr1\|scaffold_41331 (7374-7213)
	86-233, gnl\|mm7\|chr11 (102388179-102388249)
	86-233, gnl\|Mm7\|chr11 (102387776-102387943)
	86-233, gnl\|panTro1\|chr19 (42802611-42802772)
	86-233, gnl\|rheMac2\|chr16 (54271517-54271677)
	86-233, gnl\|rn3\|chr10 (91374766-91374909)

	335-541, gnl\|bosTau2\|chr19 (38116358-38116145)
	335-541, gnl\|Hg17\|chr17 (39615059-39615261)