Non-Coding RNA Search

rese36c_p3.y1

Sequence:


               
               TAGGCAGTTACCCCATTTTGAGAGCAAGAAGAACTACATCAAGTTCAGATCTTACCACTT
CATCGAGTTCATCTGGTCCTAGAGTTTCGGGTTCACCTTGTCATCATAGTGATTCTAATT
CCTCTTCTGAGAAACACATGTCACGAGCCTCACAGAGAGAAGGAGTTTCACCAAGAAATA
GTCTTGAAGTGTTAACCCCTGAAGTTCCTGGTGAGAGAGACCGTGGAAATTGTATCACAT
CCTTACAGTTGCACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAACACGGATG
ATCAGGAGTGGACTTGTGTCTATGAATTCCAAGAAGGAGCTCCTGTGCGACCCGTCTCAC
CTCGTTGTTCTCTACGACTGACTCATTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGGCAGTTACCCCATTTTGAGAGCAAGAAGAACTACATCAAGTTCAGATCTTACCACTT
CATCGAGTTCATCTGGTCCTAGAGTTTCGGGTTCACCTTGTCATCATAGTGATTCTAATT
CCTCTTCTGAGAAACACATGTCACGAGCCTCACAGAGAGAAGGAGTTTCACCAAGAAATA
GTCTTGAAGTGTTAACCCCTGAAGTTCCTGGTGAGAGAGACCGTGGAAATTGTATCACAT
CCTTACAGTTGCACCCAAAAGGCTGGGCCACTCTTCTTCGGTGCTCAAGCAACACGGATG
ATCAGGAGTGGACTTGTGTCTATGAATTCCAAGAAGGAGCTCCTGTGCGACCCGTCTCAC
CTCGTTGTTCTCTACGACTGACTCATTA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q9BTQ5_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9BTQ5_HUMAN

Aligned organism(s): 18 entry(ies)

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Aligned organism(s): 18 entry(ies)

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               161-308, gnl|bosTau2|chr8 (29047574-29047721)
               

               
               161-308, gnl|canFam2|chr11 (57171735-57171908)
               

               
               161-308, gnl|danRer3|chr13 (9067047-9067213)
               

               
               161-308, gnl|echTel1|scaffold_287878 (191145-191316)
               

               
               161-308, gnl|fr1|chrUn (181828221-181828059)
               

               
               161-308, gnl|galGal2|chrUn (1553811-1553967)
               

               
               161-308, gnl|hg17|chr9 (37850035-37850212)
               

               
               161-308, gnl|Hg17|chr9 (37850043-37850190)
               

               
               161-308, gnl|loxAfr1|scaffold_47090 (9607-9784)
               

               
               161-308, gnl|mm7|chr4 (45386728-45386905)
               

               
               161-308, gnl|Mm7|chr4 (45386736-45386883)
               

               
               161-308, gnl|monDom2|scaffold_19 (10809516-10809693)
               

               
               161-308, gnl|oryCun1|scaffold_201021 (92523-92700)
               

               
               161-308, gnl|panTro1|chr11 (38581516-38581693)
               

               
               161-308, gnl|rheMac2|chr15 (39554093-39553916)
               

               
               161-308, gnl|rn3|chr5 (61945569-61945746)
               

               
               161-308, gnl|tetNig1|chr10 (11820644-11820794)
               

               
               161-308, gnl|xenTro1|scaffold_196 (1594993-1595152)

Aligned organism(s): 18 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               161-308, gnl|bosTau2|chr8 (29047574-29047721)
               

               
               161-308, gnl|canFam2|chr11 (57171735-57171908)
               

               
               161-308, gnl|danRer3|chr13 (9067047-9067213)
               

               
               161-308, gnl|echTel1|scaffold_287878 (191145-191316)
               

               
               161-308, gnl|fr1|chrUn (181828221-181828059)
               

               
               161-308, gnl|galGal2|chrUn (1553811-1553967)
               

               
               161-308, gnl|hg17|chr9 (37850035-37850212)
               

               
               161-308, gnl|Hg17|chr9 (37850043-37850190)
               

               
               161-308, gnl|loxAfr1|scaffold_47090 (9607-9784)
               

               
               161-308, gnl|mm7|chr4 (45386728-45386905)
               

               
               161-308, gnl|Mm7|chr4 (45386736-45386883)
               

               
               161-308, gnl|monDom2|scaffold_19 (10809516-10809693)
               

               
               161-308, gnl|oryCun1|scaffold_201021 (92523-92700)
               

               
               161-308, gnl|panTro1|chr11 (38581516-38581693)
               

               
               161-308, gnl|rheMac2|chr15 (39554093-39553916)
               

               
               161-308, gnl|rn3|chr5 (61945569-61945746)
               

               
               161-308, gnl|tetNig1|chr10 (11820644-11820794)
               

               
               161-308, gnl|xenTro1|scaffold_196 (1594993-1595152)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	161-308, gnl\|bosTau2\|chr8 (29047574-29047721)
	161-308, gnl\|canFam2\|chr11 (57171735-57171908)
	161-308, gnl\|danRer3\|chr13 (9067047-9067213)
	161-308, gnl\|echTel1\|scaffold_287878 (191145-191316)
	161-308, gnl\|fr1\|chrUn (181828221-181828059)
	161-308, gnl\|galGal2\|chrUn (1553811-1553967)
	161-308, gnl\|hg17\|chr9 (37850035-37850212)
	161-308, gnl\|Hg17\|chr9 (37850043-37850190)
	161-308, gnl\|loxAfr1\|scaffold_47090 (9607-9784)
	161-308, gnl\|mm7\|chr4 (45386728-45386905)
	161-308, gnl\|Mm7\|chr4 (45386736-45386883)
	161-308, gnl\|monDom2\|scaffold_19 (10809516-10809693)
	161-308, gnl\|oryCun1\|scaffold_201021 (92523-92700)
	161-308, gnl\|panTro1\|chr11 (38581516-38581693)
	161-308, gnl\|rheMac2\|chr15 (39554093-39553916)
	161-308, gnl\|rn3\|chr5 (61945569-61945746)
	161-308, gnl\|tetNig1\|chr10 (11820644-11820794)
	161-308, gnl\|xenTro1\|scaffold_196 (1594993-1595152)