Non-Coding RNA Search

reye1610b_h17.y1

Sequence:


               
               GGAAACAAGGCTATGAATATGATTTTGCAAATTCCCATGTGTATACAAGACTGGGTTCAC
TTATAGGATTGGGTCTCATGGAGAGGTTCTAACATTCTCACAAGTGTCTGTATAAACATG
AGGGTCTTGTACATTTGACACCTGACATACATTTGGCAGGACCTGGCAATGTCACAATAT
CTGTTATTTCAACTAACTGCTAATGAATCCAAAATGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAACAAGGCTATGAATATGATTTTGCAAATTCCCATGTGTATACAAGACTGGGTTCAC
TTATAGGATTGGGTCTCATGGAGAGGTTCTAACATTCTCACAAGTGTCTGTATAAACATG
AGGGTCTTGTACATTTGACACCTGACATACATTTGGCAGGACCTGGCAATGTCACAATAT
CTGTTATTTCAACTAACTGCTAATGAATCCAAAATGGT

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               11-218, gnl|bosTau2|chr10 (42655915-42656122)
               

               
               11-218, gnl|canFam2|chr30 (17628666-17628841)
               

               
               11-218, gnl|dasNov1|scaffold_535 (8837-9021)
               

               
               11-218, gnl|echTel1|scaffold_314726 (113631-113806)
               

               
               11-218, gnl|hg17|chr15 (46487170-46487335)
               

               
               11-218, gnl|Hg17|chr15 (46487390-46487195)
               

               
               11-218, gnl|mm7|chr2 (125039451-125039588)
               

               
               11-218, gnl|monDom2|scaffold_12 (20563017-20562827)
               

               
               11-218, gnl|oryCun1|scaffold_214549 (135640-135812)
               

               
               11-218, gnl|panTro1|chr16 (46462286-46462458)
               

               
               11-218, gnl|rheMac2|chr7 (26732349-26732521)
               

               
               11-218, gnl|rn3|chr3 (112511391-112511510)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-218, gnl|bosTau2|chr10 (42655915-42656122)
               

               
               11-218, gnl|canFam2|chr30 (17628666-17628841)
               

               
               11-218, gnl|dasNov1|scaffold_535 (8837-9021)
               

               
               11-218, gnl|echTel1|scaffold_314726 (113631-113806)
               

               
               11-218, gnl|hg17|chr15 (46487170-46487335)
               

               
               11-218, gnl|Hg17|chr15 (46487390-46487195)
               

               
               11-218, gnl|mm7|chr2 (125039451-125039588)
               

               
               11-218, gnl|monDom2|scaffold_12 (20563017-20562827)
               

               
               11-218, gnl|oryCun1|scaffold_214549 (135640-135812)
               

               
               11-218, gnl|panTro1|chr16 (46462286-46462458)
               

               
               11-218, gnl|rheMac2|chr7 (26732349-26732521)
               

               
               11-218, gnl|rn3|chr3 (112511391-112511510)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eye (0.170503)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)

	11-218, gnl\|bosTau2\|chr10 (42655915-42656122)
	11-218, gnl\|canFam2\|chr30 (17628666-17628841)
	11-218, gnl\|dasNov1\|scaffold_535 (8837-9021)
	11-218, gnl\|echTel1\|scaffold_314726 (113631-113806)
	11-218, gnl\|hg17\|chr15 (46487170-46487335)
	11-218, gnl\|Hg17\|chr15 (46487390-46487195)
	11-218, gnl\|mm7\|chr2 (125039451-125039588)
	11-218, gnl\|monDom2\|scaffold_12 (20563017-20562827)
	11-218, gnl\|oryCun1\|scaffold_214549 (135640-135812)
	11-218, gnl\|panTro1\|chr16 (46462286-46462458)
	11-218, gnl\|rheMac2\|chr7 (26732349-26732521)
	11-218, gnl\|rn3\|chr3 (112511391-112511510)