Non-Coding RNA Search

reye1617b_m4r1.y1

Sequence:


               
               TAAAACTTTCCTTCCTTCCTCTGTTTATATCAAGTACAATAAAATAACTTGAATTGGTCT
CAAAGTATCACTGACAATCTAATAAATTGATTTATATGTGAAAAAAAAAAAAAAAAAAAA
AAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAAACTTTCCTTCCTTCCTCTGTTTATATCAAGTACAATAAAATAACTTGAATTGGTCT
CAAAGTATCACTGACAATCTAATAAATTGATTTATATGTGAAAAAAAAAAAAAAAAAAAA
AAAAAAAA

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               1-100, gnl|bosTau2|chr27 (14145868-14145968)
               

               
               1-100, gnl|canFam2|chr16 (36295139-36294746)
               

               
               1-100, gnl|echTel1|scaffold_172439 (991-1386)
               

               
               1-100, gnl|galGal2|chr4 (35116565-35116964)
               

               
               1-100, gnl|hg17|chr8 (30972862-30973254)
               

               
               1-100, gnl|Hg17|chr8 (30972962-30972863)
               

               
               1-100, gnl|loxAfr1|scaffold_1073 (137452-137845)
               

               
               1-100, gnl|mm7|chr8 (32185338-32184944)
               

               
               1-100, gnl|Mm7|chr8 (32185235-32185335)
               

               
               1-100, gnl|monDom2|scaffold_32 (11151589-11151202)
               

               
               1-100, gnl|oryCun1|scaffold_193059 (7267-6875)
               

               
               1-100, gnl|panTro1|chr7 (32062454-32062846)
               

               
               1-100, gnl|rheMac2|chr8 (31257002-31257394)
               

               
               1-100, gnl|rn3|chr16 (62504664-62505056)
               

               
               1-100, gnl|xenTro1|scaffold_242 (989290-989673)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-100, gnl|bosTau2|chr27 (14145868-14145968)
               

               
               1-100, gnl|canFam2|chr16 (36295139-36294746)
               

               
               1-100, gnl|echTel1|scaffold_172439 (991-1386)
               

               
               1-100, gnl|galGal2|chr4 (35116565-35116964)
               

               
               1-100, gnl|hg17|chr8 (30972862-30973254)
               

               
               1-100, gnl|Hg17|chr8 (30972962-30972863)
               

               
               1-100, gnl|loxAfr1|scaffold_1073 (137452-137845)
               

               
               1-100, gnl|mm7|chr8 (32185338-32184944)
               

               
               1-100, gnl|Mm7|chr8 (32185235-32185335)
               

               
               1-100, gnl|monDom2|scaffold_32 (11151589-11151202)
               

               
               1-100, gnl|oryCun1|scaffold_193059 (7267-6875)
               

               
               1-100, gnl|panTro1|chr7 (32062454-32062846)
               

               
               1-100, gnl|rheMac2|chr8 (31257002-31257394)
               

               
               1-100, gnl|rn3|chr16 (62504664-62505056)
               

               
               1-100, gnl|xenTro1|scaffold_242 (989290-989673)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eye (0.170503)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)

	1-100, gnl\|bosTau2\|chr27 (14145868-14145968)
	1-100, gnl\|canFam2\|chr16 (36295139-36294746)
	1-100, gnl\|echTel1\|scaffold_172439 (991-1386)
	1-100, gnl\|galGal2\|chr4 (35116565-35116964)
	1-100, gnl\|hg17\|chr8 (30972862-30973254)
	1-100, gnl\|Hg17\|chr8 (30972962-30972863)
	1-100, gnl\|loxAfr1\|scaffold_1073 (137452-137845)
	1-100, gnl\|mm7\|chr8 (32185338-32184944)
	1-100, gnl\|Mm7\|chr8 (32185235-32185335)
	1-100, gnl\|monDom2\|scaffold_32 (11151589-11151202)
	1-100, gnl\|oryCun1\|scaffold_193059 (7267-6875)
	1-100, gnl\|panTro1\|chr7 (32062454-32062846)
	1-100, gnl\|rheMac2\|chr8 (31257002-31257394)
	1-100, gnl\|rn3\|chr16 (62504664-62505056)
	1-100, gnl\|xenTro1\|scaffold_242 (989290-989673)