Non-Coding RNA Search

reye1620b_a4r1.y1

Sequence:


               
               ACTGAAAAGAAATGAAGAGATTCTCAAAGAACTCTGGGACAACTTTAAATGCACCAACAT
CCGTAATATAGGGGTGCCAGAAGGAGAAGAGAGAAAGGGACATACTCCAGTAGGTGGCAG
CAGGCATCTGCACATTATGCTGTATTCTGATTGTTAAAATCCAGAGAAATGTGATTTCCA
GTATTATTTCCTTTTCATATATTTCTGAGGTTCTTGACATTTTGTTTAAATCTGAACTCA
ATCTGCGTTTAGTTTTAGTCTCTGAGAAGCTAAACAAACCTGTTTCCATTGCCTTATTAA
AAGGGCTGGTGTGGTTCACATATAGCATTAAAGGTTTGGATAAAGCACAGTCAGGTTTCT
CGGCTCCTAACGATAATACTGCAGTAGGAAATAAGTCTAATTCAGAACCCTCTCAGCCTG
TGTGTTTATGACATACAGTTGAAGCTCCATTTGTGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGAAAAGAAATGAAGAGATTCTCAAAGAACTCTGGGACAACTTTAAATGCACCAACAT
CCGTAATATAGGGGTGCCAGAAGGAGAAGAGAGAAAGGGACATACTCCAGTAGGTGGCAG
CAGGCATCTGCACATTATGCTGTATTCTGATTGTTAAAATCCAGAGAAATGTGATTTCCA
GTATTATTTCCTTTTCATATATTTCTGAGGTTCTTGACATTTTGTTTAAATCTGAACTCA
ATCTGCGTTTAGTTTTAGTCTCTGAGAAGCTAAACAAACCTGTTTCCATTGCCTTATTAA
AAGGGCTGGTGTGGTTCACATATAGCATTAAAGGTTTGGATAAAGCACAGTCAGGTTTCT
CGGCTCCTAACGATAATACTGCAGTAGGAAATAAGTCTAATTCAGAACCCTCTCAGCCTG
TGTGTTTATGACATACAGTTGAAGCTCCATTTGTGGCT

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               3-110, gnl|bosTau2|chr1 (28801672-28801564)
               


               
               150-447, gnl|bosTau2|chr11 (37931128-37930831)
               

               
               150-447, gnl|Hg17|chr2 (84563082-84562774)
               

               
               150-447, gnl|Mm7|chr6 (73294168-73294432)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-110, gnl|bosTau2|chr1 (28801672-28801564)
               


               
               150-447, gnl|bosTau2|chr11 (37931128-37930831)
               

               
               150-447, gnl|Hg17|chr2 (84563082-84562774)
               

               
               150-447, gnl|Mm7|chr6 (73294168-73294432)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eye (0.170503)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)

	3-110, gnl\|bosTau2\|chr1 (28801672-28801564)

	150-447, gnl\|bosTau2\|chr11 (37931128-37930831)
	150-447, gnl\|Hg17\|chr2 (84563082-84562774)
	150-447, gnl\|Mm7\|chr6 (73294168-73294432)