Non-Coding RNA Search

reye1622b_c17.y1

Sequence:


               
               GGACAGCGGGCCTTTCTTTCTCGCCAAGACTCCGGCAGCCCTCGCTGAGTAGCCAAGTTC
GCCACGACCTGCCTTTTCGCAGACAGCTCTTTGTGTATAATAAAATCCAGGCAAGTGGTG
GGTGGCAGACTGCAGGGTAGTAGCTGAATTGGGTTAATGAGGGAAGAGGTACACTTTTTT
TCTTCATATTCTGCCTTAAGCTAATAAAAAATTTAGACCTGGAAAAAAAAAAAAAAAAAA
AA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACAGCGGGCCTTTCTTTCTCGCCAAGACTCCGGCAGCCCTCGCTGAGTAGCCAAGTTC
GCCACGACCTGCCTTTTCGCAGACAGCTCTTTGTGTATAATAAAATCCAGGCAAGTGGTG
GGTGGCAGACTGCAGGGTAGTAGCTGAATTGGGTTAATGAGGGAAGAGGTACACTTTTTT
TCTTCATATTCTGCCTTAAGCTAATAAAAAATTTAGACCTGGAAAAAAAAAAAAAAAAAA
AA

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

Help | Less info


               
               106-223, gnl|bosTau2|chr11 (76116194-76116078)
               

               
               106-223, gnl|canFam2|chr9 (62754822-62754636)
               

               
               106-223, gnl|dasNov1|scaffold_17495 (8333-8518)
               

               
               106-223, gnl|echTel1|scaffold_105089 (3258-3437)
               

               
               106-223, gnl|galGal2|chr17 (1404200-1404019)
               

               
               106-223, gnl|hg17|chr9 (123233451-123233643)
               

               
               106-223, gnl|Hg17|chr9 (123233680-123233556)
               

               
               106-223, gnl|mm7|chr2 (37816505-37816684)
               

               
               106-223, gnl|Mm7|chr2 (37816721-37816608)
               

               
               106-223, gnl|monDom2|scaffold_38 (17027596-17027792)
               

               
               106-223, gnl|oryCun1|scaffold_210157 (7455-7653)
               

               
               106-223, gnl|panTro1|chr11 (107940634-107940830)
               

               
               106-223, gnl|rheMac2|chr15 (12343756-12343569)
               

               
               106-223, gnl|rn3|chr3 (17467201-17467381)

Aligned organism(s): 14 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               106-223, gnl|bosTau2|chr11 (76116194-76116078)
               

               
               106-223, gnl|canFam2|chr9 (62754822-62754636)
               

               
               106-223, gnl|dasNov1|scaffold_17495 (8333-8518)
               

               
               106-223, gnl|echTel1|scaffold_105089 (3258-3437)
               

               
               106-223, gnl|galGal2|chr17 (1404200-1404019)
               

               
               106-223, gnl|hg17|chr9 (123233451-123233643)
               

               
               106-223, gnl|Hg17|chr9 (123233680-123233556)
               

               
               106-223, gnl|mm7|chr2 (37816505-37816684)
               

               
               106-223, gnl|Mm7|chr2 (37816721-37816608)
               

               
               106-223, gnl|monDom2|scaffold_38 (17027596-17027792)
               

               
               106-223, gnl|oryCun1|scaffold_210157 (7455-7653)
               

               
               106-223, gnl|panTro1|chr11 (107940634-107940830)
               

               
               106-223, gnl|rheMac2|chr15 (12343756-12343569)
               

               
               106-223, gnl|rn3|chr3 (17467201-17467381)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eye (0.170503)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)

	106-223, gnl\|bosTau2\|chr11 (76116194-76116078)
	106-223, gnl\|canFam2\|chr9 (62754822-62754636)
	106-223, gnl\|dasNov1\|scaffold_17495 (8333-8518)
	106-223, gnl\|echTel1\|scaffold_105089 (3258-3437)
	106-223, gnl\|galGal2\|chr17 (1404200-1404019)
	106-223, gnl\|hg17\|chr9 (123233451-123233643)
	106-223, gnl\|Hg17\|chr9 (123233680-123233556)
	106-223, gnl\|mm7\|chr2 (37816505-37816684)
	106-223, gnl\|Mm7\|chr2 (37816721-37816608)
	106-223, gnl\|monDom2\|scaffold_38 (17027596-17027792)
	106-223, gnl\|oryCun1\|scaffold_210157 (7455-7653)
	106-223, gnl\|panTro1\|chr11 (107940634-107940830)
	106-223, gnl\|rheMac2\|chr15 (12343756-12343569)
	106-223, gnl\|rn3\|chr3 (17467201-17467381)