Non-Coding RNA Search

reye1627b_g24.y1

Sequence:


               
               TAAAACCCAAATGGTTTATTCAAAAACCTGGAAAGGAAAGATTCGAAAGCCCCTGTCTCA
GCCGATAACTTGTAAAAGCCGCGTGGAGACCGAGTGCTACCCCAGTGCTGGGTTTCCACT
GTGATATTTATGAGTAATTTATTGTGTTTGATATGTACATCTCTTTATTTTCTTACTTTA
TTTATACCCCAAATCGTATTTATGTATGTACACGAGGGTTTTTTCTACATTAAAGCCAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAAACCCAAATGGTTTATTCAAAAACCTGGAAAGGAAAGATTCGAAAGCCCCTGTCTCA
GCCGATAACTTGTAAAAGCCGCGTGGAGACCGAGTGCTACCCCAGTGCTGGGTTTCCACT
GTGATATTTATGAGTAATTTATTGTGTTTGATATGTACATCTCTTTATTTTCTTACTTTA
TTTATACCCCAAATCGTATTTATGTATGTACACGAGGGTTTTTTCTACATTAAAGCCAAG

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               15-224, gnl|bosTau2|chr29 (40877757-40877546)
               

               
               15-224, gnl|canFam2|chr18 (51495918-51495732)
               

               
               15-224, gnl|echTel1|scaffold_243179 (1218-1025)
               

               
               15-224, gnl|hg17|chr11 (69222172-69222361)
               

               
               15-224, gnl|Hg17|chr11 (69222431-69222214)
               

               
               15-224, gnl|loxAfr1|scaffold_67085 (8632-8809)
               

               
               15-224, gnl|mm7|chr7 (141326205-141326031)
               

               
               15-224, gnl|Mm7|chr7 (141325986-141326156)
               

               
               15-224, gnl|oryCun1|scaffold_193131 (447-608)
               

               
               15-224, gnl|panTro1|chr9 (70340482-70340671)
               

               
               15-224, gnl|rheMac2|chr14 (5068719-5068530)
               

               
               15-224, gnl|rn3|chr1 (205482675-205482476)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-224, gnl|bosTau2|chr29 (40877757-40877546)
               

               
               15-224, gnl|canFam2|chr18 (51495918-51495732)
               

               
               15-224, gnl|echTel1|scaffold_243179 (1218-1025)
               

               
               15-224, gnl|hg17|chr11 (69222172-69222361)
               

               
               15-224, gnl|Hg17|chr11 (69222431-69222214)
               

               
               15-224, gnl|loxAfr1|scaffold_67085 (8632-8809)
               

               
               15-224, gnl|mm7|chr7 (141326205-141326031)
               

               
               15-224, gnl|Mm7|chr7 (141325986-141326156)
               

               
               15-224, gnl|oryCun1|scaffold_193131 (447-608)
               

               
               15-224, gnl|panTro1|chr9 (70340482-70340671)
               

               
               15-224, gnl|rheMac2|chr14 (5068719-5068530)
               

               
               15-224, gnl|rn3|chr1 (205482675-205482476)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               eye (0.170503)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)

	15-224, gnl\|bosTau2\|chr29 (40877757-40877546)
	15-224, gnl\|canFam2\|chr18 (51495918-51495732)
	15-224, gnl\|echTel1\|scaffold_243179 (1218-1025)
	15-224, gnl\|hg17\|chr11 (69222172-69222361)
	15-224, gnl\|Hg17\|chr11 (69222431-69222214)
	15-224, gnl\|loxAfr1\|scaffold_67085 (8632-8809)
	15-224, gnl\|mm7\|chr7 (141326205-141326031)
	15-224, gnl\|Mm7\|chr7 (141325986-141326156)
	15-224, gnl\|oryCun1\|scaffold_193131 (447-608)
	15-224, gnl\|panTro1\|chr9 (70340482-70340671)
	15-224, gnl\|rheMac2\|chr14 (5068719-5068530)
	15-224, gnl\|rn3\|chr1 (205482675-205482476)