reye1633b_n17r1.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGAGCGTGGGCCAGGCCACCATAGTGGAGATCTTCTTGACACTCCAGTTCGTGCTCTGC ATCTTTGCCACGTACGATGAGAGGCGGAATGGCCGCCTGGGCTCCGTGGCCCTGGCTGTG GGCTTCTCCCTCACCCTGGGGCACCTCTTTGGGATGTATTATACCGGTGCAGGCATGAAC CCTGCCCGCTCCTTTGCTCCTGCCATTCTTACCAGAAGCTTCACCAACCACTGGGTGTAC TGGGTGGGCCCAATCATGGGCGCGGGCCTGGGCAGTCTCCTTTACGACTTTCTCCTCTTC CCCCGGCTCAAGAGTGTTTCTGAGAGACTGTCTATTCTCAAGGGTGCCAGGCCCAGTGAC TCCAATGGACAACCAGAGGGCACAGGGGAACCTGTTGAACTGAAGACCCAGGCACTGTAA AAGCTCCAGCTGGATCAGAAGGAGTAGGAATCTTCTGGGTTTACATGGAGGGGCCTGGAT GAAGAAAGAGACTGTGGGAGGGGCATGTACTTCTTTATTTTTAAATTTATGTGTGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGAGCGTGGGCCAGGCCACCATAGTGGAGATCTTCTTGACACTCCAGTTCGTGCTCTGC ATCTTTGCCACGTACGATGAGAGGCGGAATGGCCGCCTGGGCTCCGTGGCCCTGGCTGTG GGCTTCTCCCTCACCCTGGGGCACCTCTTTGGGATGTATTATACCGGTGCAGGCATGAAC CCTGCCCGCTCCTTTGCTCCTGCCATTCTTACCAGAAGCTTCACCAACCACTGGGTGTAC TGGGTGGGCCCAATCATGGGCGCGGGCCTGGGCAGTCTCCTTTACGACTTTCTCCTCTTC CCCCGGCTCAAGAGTGTTTCTGAGAGACTGTCTATTCTCAAGGGTGCCAGGCCCAGTGAC TCCAATGGACAACCAGAGGGCACAGGGGAACCTGTTGAACTGAAGACCCAGGCACTGTAA AAGCTCCAGCTGGATCAGAAGGAGTAGGAATCTTCTGGGTTTACATGGAGGGGCCTGGAT GAAGAAAGAGACTGTGGGAGGGGCATGTACTTCTTTATTTTTAAATTTATGTGTGTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 1-153, + strand, RNAz p=0.868424 | |
| 353-472, + strand, RNAz p=0.712934 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-153, + strand, RNAz p=0.868424 | |
| 353-472, + strand, RNAz p=0.712934 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_012064, + |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-153, gnl|bosTau2|chr5 (33240998-33241150) | |
| 1-153, gnl|canFam2|chr10 (3688182-3688315) | |
| 1-153, gnl|danRer3|chr23 (2056310-2056177) | |
| 1-153, gnl|dasNov1|scaffold_28342 (38636-38526) | |
| 1-153, gnl|echTel1|scaffold_22493 (3748-3881) | |
| 1-153, gnl|fr1|chrUn (184546794-184546661) | |
| 1-153, gnl|galGal2|chrUn (75047994-75048127) | |
| 1-153, gnl|hg17|chr12 (55133638-55133771) | |
| 1-153, gnl|Hg17|chr12 (55133794-55133642) | |
| 1-153, gnl|loxAfr1|scaffold_236 (98484-98617) | |
| 1-153, gnl|mm7|chr10 (127728715-127728582) | |
| 1-153, gnl|Mm7|chr10 (127728557-127728709) | |
| 1-153, gnl|monDom2|scaffold_243 (308552-308685) | |
| 1-153, gnl|oryCun1|scaffold_182377 (15890-16023) | |
| 1-153, gnl|panTro1|chr10 (56385017-56385150) | |
| 1-153, gnl|rheMac2|chr11 (53541208-53541341) | |
| 1-153, gnl|rn3|chr7 (1510372-1510239) | |
| 1-153, gnl|tetNig1|chr9 (7517570-7517703) | |
| 1-153, gnl|xenTro1|scaffold_85 (1250892-1250759) | |
| 234-536, gnl|bosTau2|chr5 (33243166-33243479) | |
| 234-536, gnl|Hg17|chr12 (55131517-55131195) | |
| 234-536, gnl|Mm7|chr10 (127731815-127732125) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-153, gnl|bosTau2|chr5 (33240998-33241150) | |
| 1-153, gnl|canFam2|chr10 (3688182-3688315) | |
| 1-153, gnl|danRer3|chr23 (2056310-2056177) | |
| 1-153, gnl|dasNov1|scaffold_28342 (38636-38526) | |
| 1-153, gnl|echTel1|scaffold_22493 (3748-3881) | |
| 1-153, gnl|fr1|chrUn (184546794-184546661) | |
| 1-153, gnl|galGal2|chrUn (75047994-75048127) | |
| 1-153, gnl|hg17|chr12 (55133638-55133771) | |
| 1-153, gnl|Hg17|chr12 (55133794-55133642) | |
| 1-153, gnl|loxAfr1|scaffold_236 (98484-98617) | |
| 1-153, gnl|mm7|chr10 (127728715-127728582) | |
| 1-153, gnl|Mm7|chr10 (127728557-127728709) | |
| 1-153, gnl|monDom2|scaffold_243 (308552-308685) | |
| 1-153, gnl|oryCun1|scaffold_182377 (15890-16023) | |
| 1-153, gnl|panTro1|chr10 (56385017-56385150) | |
| 1-153, gnl|rheMac2|chr11 (53541208-53541341) | |
| 1-153, gnl|rn3|chr7 (1510372-1510239) | |
| 1-153, gnl|tetNig1|chr9 (7517570-7517703) | |
| 1-153, gnl|xenTro1|scaffold_85 (1250892-1250759) | |
| 234-536, gnl|bosTau2|chr5 (33243166-33243479) | |
| 234-536, gnl|Hg17|chr12 (55131517-55131195) | |
| 234-536, gnl|Mm7|chr10 (127731815-127732125) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eye (0.170503) |