Non-Coding RNA Search

rfat0106_p9.y1

Sequence:


               
               AGAAAATGGTAAATTAAGAAAAAAGCAGAAACCCGGAAAGACAAATGTGCTCATAGTGAA
GGAGCACACAGACACATAAAACATTTGGTTGTCTAGGCAGACAACTAAAATGCTTAGAAG
GAATAAGTGGAGCTGGTCTTTTCTGTCAATAAGGAAGGAGGAAGGAGGTGCTTTGGGGTT
TTAGTACCTCCCTGTGCCACTTCAAATAAAGGTGCAGGCATATCTAAGAGGAGTCTGCCT
TCTCAGCTCATGCAGGCAAGTCCCCAAGTCTTCCCTAACCCCTCCAAAACTCAGTTCTGC
CCCTCACTTCTTCCCGTGGAGAAATTATAGAGTGGTTGCTAGCTTAAGAAAGGCCTCCTT
CCCTCTGTCTCTTCCTTCCTTTTTGTTGGTTCTACAAAATTGTTTCCTCTGAGAAATAAT
AATGGATTTAAAAAAAAAAAAACTGTCATGTTAAGCTGTGAATTTTTCACTGTTTTTTAA
AAATCATAATGCATGCGAAAACATTTGGTAGGTAGATTATCAAGAAATGATAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAAATGGTAAATTAAGAAAAAAGCAGAAACCCGGAAAGACAAATGTGCTCATAGTGAA
GGAGCACACAGACACATAAAACATTTGGTTGTCTAGGCAGACAACTAAAATGCTTAGAAG
GAATAAGTGGAGCTGGTCTTTTCTGTCAATAAGGAAGGAGGAAGGAGGTGCTTTGGGGTT
TTAGTACCTCCCTGTGCCACTTCAAATAAAGGTGCAGGCATATCTAAGAGGAGTCTGCCT
TCTCAGCTCATGCAGGCAAGTCCCCAAGTCTTCCCTAACCCCTCCAAAACTCAGTTCTGC
CCCTCACTTCTTCCCGTGGAGAAATTATAGAGTGGTTGCTAGCTTAAGAAAGGCCTCCTT
CCCTCTGTCTCTTCCTTCCTTTTTGTTGGTTCTACAAAATTGTTTCCTCTGAGAAATAAT
AATGGATTTAAAAAAAAAAAAACTGTCATGTTAAGCTGTGAATTTTTCACTGTTTTTTAA
AAATCATAATGCATGCGAAAACATTTGGTAGGTAGATTATCAAGAAATGATAATC

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-192, gnl|bosTau2|chr9 (12909667-12909488)
               

               
               1-192, gnl|Hg17|chr6 (126196025-126196542)
               

               
               1-192, gnl|Mm7|chr10 (30527807-30527582)
               


               
               254-532, gnl|bosTau2|chr9 (12909142-12908867)
               

               
               254-532, gnl|Hg17|chr6 (126196637-126196911)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-192, gnl|bosTau2|chr9 (12909667-12909488)
               

               
               1-192, gnl|Hg17|chr6 (126196025-126196542)
               

               
               1-192, gnl|Mm7|chr10 (30527807-30527582)
               


               
               254-532, gnl|bosTau2|chr9 (12909142-12908867)
               

               
               254-532, gnl|Hg17|chr6 (126196637-126196911)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fat (0.147427)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)

	1-192, gnl\|bosTau2\|chr9 (12909667-12909488)
	1-192, gnl\|Hg17\|chr6 (126196025-126196542)
	1-192, gnl\|Mm7\|chr10 (30527807-30527582)

	254-532, gnl\|bosTau2\|chr9 (12909142-12908867)
	254-532, gnl\|Hg17\|chr6 (126196637-126196911)