Non-Coding RNA Search

rfat0138_i20.y1

Sequence:


               
               AACACCCAGCCTGATTATTTTCACCCTGAGCCGAAGCGTCTCCCATGACACTGCAGTTAT
AAATCGCGACGAAAACGCGTCGTGGTGGTTGTTTACAAAGCGGGATGGAGGCCGCGTCGC
TTCTGCAGGCGGTGGACTCTGCTCCTCTAGCAAGGAAGCCTAGCGGGCATGTGCCAGCGT
CAGGGGCACTGCAGGGTCGGAAAAGCAAGGGGACTTTTTAAAAAATGGATATCTCCGAGG
CGTTGGGATATTTTCTTCTTTTTTTCCTCTTTTATAACCCACCTCAGAATATAAAAGACA
TAATAGATGTTTTAATTTTTACATCTTTCCAACTGGGAAAATGTCCAGAATAAGATCCAA
ACAAAACAAATTAAATAATTTTGTGCACGCAATTATAGAACAGAAGCAACACTCTTCTAA
AACAGGCAATCAAAAAACAAAACAGTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACACCCAGCCTGATTATTTTCACCCTGAGCCGAAGCGTCTCCCATGACACTGCAGTTAT
AAATCGCGACGAAAACGCGTCGTGGTGGTTGTTTACAAAGCGGGATGGAGGCCGCGTCGC
TTCTGCAGGCGGTGGACTCTGCTCCTCTAGCAAGGAAGCCTAGCGGGCATGTGCCAGCGT
CAGGGGCACTGCAGGGTCGGAAAAGCAAGGGGACTTTTTAAAAAATGGATATCTCCGAGG
CGTTGGGATATTTTCTTCTTTTTTTCCTCTTTTATAACCCACCTCAGAATATAAAAGACA
TAATAGATGTTTTAATTTTTACATCTTTCCAACTGGGAAAATGTCCAGAATAAGATCCAA
ACAAAACAAATTAAATAATTTTGTGCACGCAATTATAGAACAGAAGCAACACTCTTCTAA
AACAGGCAATCAAAAAACAAAACAGTGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-448, gnl|bosTau2|chr5 (72357247-72357694)
               

               
               4-448, gnl|Hg17|chr22 (42455778-42455335)
               

               
               4-448, gnl|Mm7|chr15 (84070103-84069710)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-448, gnl|bosTau2|chr5 (72357247-72357694)
               

               
               4-448, gnl|Hg17|chr22 (42455778-42455335)
               

               
               4-448, gnl|Mm7|chr15 (84070103-84069710)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fat (0.147427)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)

	4-448, gnl\|bosTau2\|chr5 (72357247-72357694)
	4-448, gnl\|Hg17\|chr22 (42455778-42455335)
	4-448, gnl\|Mm7\|chr15 (84070103-84069710)