Non-Coding RNA Search

rfbs3906b_h7.y1

Sequence:


               
               CAGAAGCCCAAGGTCATGAAAAGAGGCCCTGGAGGATGAGATATCAAGTAGAGAATTGAA
GAAGCACCAAGAAACCACAAGTGAAGTGTAAGTGAAGAAGACATTTTGGAAATGGATCCT
CCAGCCGCACTGCCTTGACTATTGCTGCGCAAATCAGGTGAACTGCCCAGTTGGAGCCCC
TCCCAATTTTTGACCAATGACGTGATGAGCAAAATAAAATGGTTTTTTTTTTTaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGAAGCCCAAGGTCATGAAAAGAGGCCCTGGAGGATGAGATATCAAGTAGAGAATTGAA
GAAGCACCAAGAAACCACAAGTGAAGTGTAAGTGAAGAAGACATTTTGGAAATGGATCCT
CCAGCCGCACTGCCTTGACTATTGCTGCGCAAATCAGGTGAACTGCCCAGTTGGAGCCCC
TCCCAATTTTTGACCAATGACGTGATGAGCAAAATAAAATGGTTTTTTTTTTTaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

Help | Less info


               
               2-230, gnl|bosTau2|chr11 (58553704-58553479)
               

               
               2-230, gnl|canFam2|chr18 (29100768-29100344)
               

               
               2-230, gnl|dasNov1|scaffold_106465 (2616-3021)
               

               
               2-230, gnl|echTel1|scaffold_292983 (43434-43860)
               

               
               2-230, gnl|hg17|chr11 (43627900-43628318)
               

               
               2-230, gnl|Hg17|chr11 (43628002-43628228)
               

               
               2-230, gnl|loxAfr1|scaffold_4559 (131886-132310)
               

               
               2-230, gnl|mm7|chr2 (94022502-94022172)
               

               
               2-230, gnl|oryCun1|scaffold_192326 (852-1254)
               

               
               2-230, gnl|panTro1|chr9 (44123858-44124275)
               

               
               2-230, gnl|rheMac2|chr14 (28440433-28440015)
               

               
               2-230, gnl|rn3|chr3 (78477795-78477430)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-230, gnl|bosTau2|chr11 (58553704-58553479)
               

               
               2-230, gnl|canFam2|chr18 (29100768-29100344)
               

               
               2-230, gnl|dasNov1|scaffold_106465 (2616-3021)
               

               
               2-230, gnl|echTel1|scaffold_292983 (43434-43860)
               

               
               2-230, gnl|hg17|chr11 (43627900-43628318)
               

               
               2-230, gnl|Hg17|chr11 (43628002-43628228)
               

               
               2-230, gnl|loxAfr1|scaffold_4559 (131886-132310)
               

               
               2-230, gnl|mm7|chr2 (94022502-94022172)
               

               
               2-230, gnl|oryCun1|scaffold_192326 (852-1254)
               

               
               2-230, gnl|panTro1|chr9 (44123858-44124275)
               

               
               2-230, gnl|rheMac2|chr14 (28440433-28440015)
               

               
               2-230, gnl|rn3|chr3 (78477795-78477430)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               fbs (0.175346)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)

	2-230, gnl\|bosTau2\|chr11 (58553704-58553479)
	2-230, gnl\|canFam2\|chr18 (29100768-29100344)
	2-230, gnl\|dasNov1\|scaffold_106465 (2616-3021)
	2-230, gnl\|echTel1\|scaffold_292983 (43434-43860)
	2-230, gnl\|hg17\|chr11 (43627900-43628318)
	2-230, gnl\|Hg17\|chr11 (43628002-43628228)
	2-230, gnl\|loxAfr1\|scaffold_4559 (131886-132310)
	2-230, gnl\|mm7\|chr2 (94022502-94022172)
	2-230, gnl\|oryCun1\|scaffold_192326 (852-1254)
	2-230, gnl\|panTro1\|chr9 (44123858-44124275)
	2-230, gnl\|rheMac2\|chr14 (28440433-28440015)
	2-230, gnl\|rn3\|chr3 (78477795-78477430)