Non-Coding RNA Search

rfbs3906b_p21.y1

Sequence:


               
               ATGGCTACCCCATCAGAACAAGGGCTAAGGGTTTATGGGTCAAGAGCATTTGATCAGAAT
TTCAAAGGGTGGTACATTCTGAAACACAGCCCGACCAAACCATTGTTCCACCTCTTGAAC
TTTCTCCCTTTCCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGCTACCCCATCAGAACAAGGGCTAAGGGTTTATGGGTCAAGAGCATTTGATCAGAAT
TTCAAAGGGTGGTACATTCTGAAACACAGCCCGACCAAACCATTGTTCCACCTCTTGAAC
TTTCTCCCTTTCCTCT

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               11-136, gnl|bosTau2|chr10 (30592460-30592585)
               

               
               11-136, gnl|canFam2|chr30 (32115390-32115956)
               

               
               11-136, gnl|echTel1|scaffold_320164 (46427-46809)
               

               
               11-136, gnl|hg17|chr15 (62764689-62765244)
               

               
               11-136, gnl|Hg17|chr15 (62765061-62765191)
               

               
               11-136, gnl|loxAfr1|scaffold_38194 (5292-5798)
               

               
               11-136, gnl|mm7|chr9 (65721863-65721297)
               

               
               11-136, gnl|Mm7|chr9 (65721448-65721342)
               

               
               11-136, gnl|monDom2|scaffold_12 (48749809-48749375)
               

               
               11-136, gnl|panTro1|chr16 (63231456-63232011)
               

               
               11-136, gnl|rheMac2|chr7 (43143567-43144117)
               

               
               11-136, gnl|rn3|chr8 (69969510-69968998)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-136, gnl|bosTau2|chr10 (30592460-30592585)
               

               
               11-136, gnl|canFam2|chr30 (32115390-32115956)
               

               
               11-136, gnl|echTel1|scaffold_320164 (46427-46809)
               

               
               11-136, gnl|hg17|chr15 (62764689-62765244)
               

               
               11-136, gnl|Hg17|chr15 (62765061-62765191)
               

               
               11-136, gnl|loxAfr1|scaffold_38194 (5292-5798)
               

               
               11-136, gnl|mm7|chr9 (65721863-65721297)
               

               
               11-136, gnl|Mm7|chr9 (65721448-65721342)
               

               
               11-136, gnl|monDom2|scaffold_12 (48749809-48749375)
               

               
               11-136, gnl|panTro1|chr16 (63231456-63232011)
               

               
               11-136, gnl|rheMac2|chr7 (43143567-43144117)
               

               
               11-136, gnl|rn3|chr8 (69969510-69968998)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               fbs (0.175346)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)

	11-136, gnl\|bosTau2\|chr10 (30592460-30592585)
	11-136, gnl\|canFam2\|chr30 (32115390-32115956)
	11-136, gnl\|echTel1\|scaffold_320164 (46427-46809)
	11-136, gnl\|hg17\|chr15 (62764689-62765244)
	11-136, gnl\|Hg17\|chr15 (62765061-62765191)
	11-136, gnl\|loxAfr1\|scaffold_38194 (5292-5798)
	11-136, gnl\|mm7\|chr9 (65721863-65721297)
	11-136, gnl\|Mm7\|chr9 (65721448-65721342)
	11-136, gnl\|monDom2\|scaffold_12 (48749809-48749375)
	11-136, gnl\|panTro1\|chr16 (63231456-63232011)
	11-136, gnl\|rheMac2\|chr7 (43143567-43144117)
	11-136, gnl\|rn3\|chr8 (69969510-69968998)