Non-Coding RNA Search

rfbs3913b_l18.y1

Sequence:


               
               TTGGTGCCTTTGTTGGTTTCTCCATTCCATATGTTACTGAAGCTGGACTAGCTCTGAGAA
ACAGTTCCCAGTGGGGCTCACCCTGTTTTCAAAATGCTGACTTATCAGAGCGGTCTATGA
AAGCACAGCAGCCTCTCACTTGTGGATTCTCCAGTGCACTAAAGAGGAAAACTAGATTCT
CTTTGGCTTTCCTTCCACTCTTTTCTGCTCCTCAGTTTCCCCACATCCCCTAACTTGCTA
CACCAAGAAGCTTTATCTCCACCTGACAGGTTTATGAGAGTACAAGAGTCTCAGGGAACA
TGCAGAAATGAATGAAAGAGGTgttccccttggggcacagaggaaatgaatctgaccagt
atccacgaggatgtgggttggattcctggcctcgctcagtgggttaagcctctggtgtag
gctggcagctgtagctccgattcgacccccagcctgggaacttccatatgccaagggtgc
agccctaaaaagCAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGTGCCTTTGTTGGTTTCTCCATTCCATATGTTACTGAAGCTGGACTAGCTCTGAGAA
ACAGTTCCCAGTGGGGCTCACCCTGTTTTCAAAATGCTGACTTATCAGAGCGGTCTATGA
AAGCACAGCAGCCTCTCACTTGTGGATTCTCCAGTGCACTAAAGAGGAAAACTAGATTCT
CTTTGGCTTTCCTTCCACTCTTTTCTGCTCCTCAGTTTCCCCACATCCCCTAACTTGCTA
CACCAAGAAGCTTTATCTCCACCTGACAGGTTTATGAGAGTACAAGAGTCTCAGGGAACA
TGCAGAAATGAATGAAAGAGGTgttccccttggggcacagaggaaatgaatctgaccagt
atccacgaggatgtgggttggattcctggcctcgctcagtgggttaagcctctggtgtag
gctggcagctgtagctccgattcgacccccagcctgggaacttccatatgccaagggtgc
agccctaaaaagCAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-318, gnl|bosTau2|chr6 (35786522-35786181)
               

               
               1-318, gnl|Hg17|chr4 (55797593-55797930)
               

               
               1-318, gnl|Mm7|chr5 (75363300-75363619)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-318, gnl|bosTau2|chr6 (35786522-35786181)
               

               
               1-318, gnl|Hg17|chr4 (55797593-55797930)
               

               
               1-318, gnl|Mm7|chr5 (75363300-75363619)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fbs (0.175346)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)

	1-318, gnl\|bosTau2\|chr6 (35786522-35786181)
	1-318, gnl\|Hg17\|chr4 (55797593-55797930)
	1-318, gnl\|Mm7\|chr5 (75363300-75363619)