Non-Coding RNA Search

rfbs3917b_o18.y1

Sequence:


               
               AAAATTTGTTCCAGATAGGGCAGGAGGAGAGAAGGCATAATGGGACCCATAGTAGTGCTG
GAGTATTGTTCATAAGTGAGGTCCCTGGTGCAAGGTAAGGTTGGAGAGGTAAGCACAGAC
CAAGTTATAGAAGACCTGAAGTTCCAAACAAAATAATTTAGATTTTATCTTTTAGACAGT
TGAGAGCCATTGAAAGACTGAGCTAAAGAGTAATGTGACAGTTTTGTGTTTCGGAAGAAG
AGTCACTGACACCTGTATAGTAGTGGTTTGAAAGGGGCAGTCAGGAGAGTCTCAATTAAA
GTAGTATTGggagttcccactgtggtccagcagaaacaaatctggctagtatccatgaag
atgcagattcaatcccgggcctcactccatggtttaaggatctggtgttgctgtggcGTA
TAGGCCAGCATCTGCAGGTCTGATTTATCATGCTCACTTGGAAACCTAGCCTAGCTAGGA
ACTTCCACATGCCATGAGTGCAGCCCTAAAAAGAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATTTGTTCCAGATAGGGCAGGAGGAGAGAAGGCATAATGGGACCCATAGTAGTGCTG
GAGTATTGTTCATAAGTGAGGTCCCTGGTGCAAGGTAAGGTTGGAGAGGTAAGCACAGAC
CAAGTTATAGAAGACCTGAAGTTCCAAACAAAATAATTTAGATTTTATCTTTTAGACAGT
TGAGAGCCATTGAAAGACTGAGCTAAAGAGTAATGTGACAGTTTTGTGTTTCGGAAGAAG
AGTCACTGACACCTGTATAGTAGTGGTTTGAAAGGGGCAGTCAGGAGAGTCTCAATTAAA
GTAGTATTGggagttcccactgtggtccagcagaaacaaatctggctagtatccatgaag
atgcagattcaatcccgggcctcactccatggtttaaggatctggtgttgctgtggcGTA
TAGGCCAGCATCTGCAGGTCTGATTTATCATGCTCACTTGGAAACCTAGCCTAGCTAGGA
ACTTCCACATGCCATGAGTGCAGCCCTAAAAAGAAAAAAAAAAAAAAA

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

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               41-277, gnl|bosTau2|chr21 (34493008-34493245)
               

               
               41-277, gnl|canFam2|chr30 (13496526-13496711)
               

               
               41-277, gnl|hg17|chr15 (41843372-41843591)
               

               
               41-277, gnl|panTro1|chr16 (41752334-41752553)
               

               
               41-277, gnl|rheMac2|chr7 (22151895-22152111)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               41-277, gnl|bosTau2|chr21 (34493008-34493245)
               

               
               41-277, gnl|canFam2|chr30 (13496526-13496711)
               

               
               41-277, gnl|hg17|chr15 (41843372-41843591)
               

               
               41-277, gnl|panTro1|chr16 (41752334-41752553)
               

               
               41-277, gnl|rheMac2|chr7 (22151895-22152111)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fbs (0.175346)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)

	41-277, gnl\|bosTau2\|chr21 (34493008-34493245)
	41-277, gnl\|canFam2\|chr30 (13496526-13496711)
	41-277, gnl\|hg17\|chr15 (41843372-41843591)
	41-277, gnl\|panTro1\|chr16 (41752334-41752553)
	41-277, gnl\|rheMac2\|chr7 (22151895-22152111)