Non-Coding RNA Search

rfbs3918b_m22.y1

Sequence:


               
               TTTTCCGGTTGGCCCAATTGGCCTATTGGCTTCATGGCGAGAGAGAGAGTAGGGAGAAAA
ATCAAATGAAAAGGGGGAAAAAAAAAACTCTGGAGAGCTTGTGAGTTCAGACAGGAAACA
GGTGAGTCGTTTGAATTGGATGCAGTGTGGGCCATTGTAGAATGACACTGACTGATCATT
ATTATTCGTGGTAACATCTGAAGAGAAGGAGAAGGAAGGTGTTTCTGGATAATGTTCTTC
CACATTCCTGGAATCTGCAAGGCAAGAGGTTGCGGCGGAGAGTTCTTCCTCCCAGTCTGG
GGACTGGCTGAAGCTGCGTGGCATCCGAGGAATGTTTCAGATATGTCTGTGTTTCTCTGC
ATTCCTTCCTGTACCTCATCGTTCAATTCACTTTTGTAAATTCCACCTAACATTTAAATA
TTTTTAATTTCTCCTTTGACCTTAATCTCCTTGCTAATTTTATCTGTCTAATTAAAATGA
GCAGAAGCATGTCCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCCGGTTGGCCCAATTGGCCTATTGGCTTCATGGCGAGAGAGAGAGTAGGGAGAAAA
ATCAAATGAAAAGGGGGAAAAAAAAAACTCTGGAGAGCTTGTGAGTTCAGACAGGAAACA
GGTGAGTCGTTTGAATTGGATGCAGTGTGGGCCATTGTAGAATGACACTGACTGATCATT
ATTATTCGTGGTAACATCTGAAGAGAAGGAGAAGGAAGGTGTTTCTGGATAATGTTCTTC
CACATTCCTGGAATCTGCAAGGCAAGAGGTTGCGGCGGAGAGTTCTTCCTCCCAGTCTGG
GGACTGGCTGAAGCTGCGTGGCATCCGAGGAATGTTTCAGATATGTCTGTGTTTCTCTGC
ATTCCTTCCTGTACCTCATCGTTCAATTCACTTTTGTAAATTCCACCTAACATTTAAATA
TTTTTAATTTCTCCTTTGACCTTAATCTCCTTGCTAATTTTATCTGTCTAATTAAAATGA
GCAGAAGCATGTCCGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-312, gnl|bosTau2|chr3 (11321732-11321425)
               

               
               1-312, gnl|Hg17|chr3 (136461517-136461798)
               

               
               1-312, gnl|Mm7|chr9 (101612527-101612240)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-312, gnl|bosTau2|chr3 (11321732-11321425)
               

               
               1-312, gnl|Hg17|chr3 (136461517-136461798)
               

               
               1-312, gnl|Mm7|chr9 (101612527-101612240)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fbs (0.175346)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)

	1-312, gnl\|bosTau2\|chr3 (11321732-11321425)
	1-312, gnl\|Hg17\|chr3 (136461517-136461798)
	1-312, gnl\|Mm7\|chr9 (101612527-101612240)