Non-Coding RNA Search

rfbs3921b_e21.y1

Sequence:


               
               ATATTTAAGCACATATGGCCTAAGGGCCAAGTTTTAGCATAGATCGTACATTCATGTTTA
ATTATGGAGAATGTTTACAGCTGGTCTTTATGAAGCCTTTCTAATCAAGGATTCAGGCTA
AGAGATTTTAAATGGAGGAAATTAAATTCTCATCTACTCATCTTTTAATGTTTTTATTTT
TCCTACTTTTACTGAAACACAGGCATTCATCTGGCTGCTGGTATAAGTACAAGCTTCATT
TTAAACTCAAATCACATGCAAATGCAGCGTAAATTGGCTTTAAATTAATGCTAATCACAT
TAACTCTACATTTTCCCCTAAAACAATAAGTAGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATATTTAAGCACATATGGCCTAAGGGCCAAGTTTTAGCATAGATCGTACATTCATGTTTA
ATTATGGAGAATGTTTACAGCTGGTCTTTATGAAGCCTTTCTAATCAAGGATTCAGGCTA
AGAGATTTTAAATGGAGGAAATTAAATTCTCATCTACTCATCTTTTAATGTTTTTATTTT
TCCTACTTTTACTGAAACACAGGCATTCATCTGGCTGCTGGTATAAGTACAAGCTTCATT
TTAAACTCAAATCACATGCAAATGCAGCGTAAATTGGCTTTAAATTAATGCTAATCACAT
TAACTCTACATTTTCCCCTAAAACAATAAGTAGGGG

Aligned organism(s): 14 entry(ies)

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Aligned organism(s): 14 entry(ies)

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               2-332, gnl|bosTau2|chr1 (39083539-39083201)
               

               
               2-332, gnl|canFam2|chr33 (28984720-28985104)
               

               
               2-332, gnl|dasNov1|scaffold_69474 (372-5)
               

               
               2-332, gnl|echTel1|scaffold_181211 (11348-11694)
               

               
               2-332, gnl|hg17|chr3 (124084200-124084602)
               

               
               2-332, gnl|Hg17|chr3 (124084337-124084689)
               

               
               2-332, gnl|loxAfr1|scaffold_11306 (4-395)
               

               
               2-332, gnl|mm7|chr16 (35368609-35368231)
               

               
               2-332, gnl|Mm7|chr16 (35368476-35368137)
               

               
               2-332, gnl|monDom2|scaffold_24 (20563589-20564018)
               

               
               2-332, gnl|oryCun1|scaffold_166157 (17307-17689)
               

               
               2-332, gnl|panTro1|chr2_random (7079183-7078770)
               

               
               2-332, gnl|rheMac2|chr2 (42871179-42871569)
               

               
               2-332, gnl|rn3|chr11 (66970137-66970516)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-332, gnl|bosTau2|chr1 (39083539-39083201)
               

               
               2-332, gnl|canFam2|chr33 (28984720-28985104)
               

               
               2-332, gnl|dasNov1|scaffold_69474 (372-5)
               

               
               2-332, gnl|echTel1|scaffold_181211 (11348-11694)
               

               
               2-332, gnl|hg17|chr3 (124084200-124084602)
               

               
               2-332, gnl|Hg17|chr3 (124084337-124084689)
               

               
               2-332, gnl|loxAfr1|scaffold_11306 (4-395)
               

               
               2-332, gnl|mm7|chr16 (35368609-35368231)
               

               
               2-332, gnl|Mm7|chr16 (35368476-35368137)
               

               
               2-332, gnl|monDom2|scaffold_24 (20563589-20564018)
               

               
               2-332, gnl|oryCun1|scaffold_166157 (17307-17689)
               

               
               2-332, gnl|panTro1|chr2_random (7079183-7078770)
               

               
               2-332, gnl|rheMac2|chr2 (42871179-42871569)
               

               
               2-332, gnl|rn3|chr11 (66970137-66970516)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fbs (0.175346)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)

	2-332, gnl\|bosTau2\|chr1 (39083539-39083201)
	2-332, gnl\|canFam2\|chr33 (28984720-28985104)
	2-332, gnl\|dasNov1\|scaffold_69474 (372-5)
	2-332, gnl\|echTel1\|scaffold_181211 (11348-11694)
	2-332, gnl\|hg17\|chr3 (124084200-124084602)
	2-332, gnl\|Hg17\|chr3 (124084337-124084689)
	2-332, gnl\|loxAfr1\|scaffold_11306 (4-395)
	2-332, gnl\|mm7\|chr16 (35368609-35368231)
	2-332, gnl\|Mm7\|chr16 (35368476-35368137)
	2-332, gnl\|monDom2\|scaffold_24 (20563589-20564018)
	2-332, gnl\|oryCun1\|scaffold_166157 (17307-17689)
	2-332, gnl\|panTro1\|chr2_random (7079183-7078770)
	2-332, gnl\|rheMac2\|chr2 (42871179-42871569)
	2-332, gnl\|rn3\|chr11 (66970137-66970516)