rfbs3933b_c24.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAAAGTGTCCCCCTCCCGAACCAACTCCCTGTCCCCACCTGTGCCCCCTCTGATGCCTG GACTCACACCATGGCCCCACAGACTCAAGGTGCAAAATATACATGAGTTACTAACACACA GACTCCCCGCTTCCAATCCTTTACACACACACCCCATCACTCCAACCTCAAATACATGGC AGGCCCACAGGAATTCCCAGATACCCTACAAGCAAGTCACCAGGACTTTGAGGGAGCCGT TACCTGGGGCTCCGGCAGCAGAACCCACCCTGGTGGTCTCTAGACGGTTGTTCTGAGAAA TCATCAACACCAAATCCTCCAGTCCCTCCAAATTTGAGTTTGTTGTTTTAACCTTTAACA GCCTTTTCAGGTAAAAAGTAACAAAGACCAATTTACTGACTTTGCAGCTACCATGTGCCT GGAAAAGCATTTACTTAAAAGAAAGACTGGGAGGAAGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAAAGTGTCCCCCTCCCGAACCAACTCCCTGTCCCCACCTGTGCCCCCTCTGATGCCTG GACTCACACCATGGCCCCACAGACTCAAGGTGCAAAATATACATGAGTTACTAACACACA GACTCCCCGCTTCCAATCCTTTACACACACACCCCATCACTCCAACCTCAAATACATGGC AGGCCCACAGGAATTCCCAGATACCCTACAAGCAAGTCACCAGGACTTTGAGGGAGCCGT TACCTGGGGCTCCGGCAGCAGAACCCACCCTGGTGGTCTCTAGACGGTTGTTCTGAGAAA TCATCAACACCAAATCCTCCAGTCCCTCCAAATTTGAGTTTGTTGTTTTAACCTTTAACA GCCTTTTCAGGTAAAAAGTAACAAAGACCAATTTACTGACTTTGCAGCTACCATGTGCCT GGAAAAGCATTTACTTAAAAGAAAGACTGGGAGGAAGGA |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 153-252, - strand, RNAz p=0.50982 | |
| 348-457, + strand, RNAz p=0.803176 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 153-252, - strand, RNAz p=0.50982 | |
| 348-457, + strand, RNAz p=0.803176 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 153-457, gnl|bosTau2|chr16 (44936604-44936299) | |
| 153-457, gnl|Hg17|chr1 (172016648-172016245) | |
| 153-457, gnl|Mm7|chr1 (159893211-159893557) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 153-457, gnl|bosTau2|chr16 (44936604-44936299) | |
| 153-457, gnl|Hg17|chr1 (172016648-172016245) | |
| 153-457, gnl|Mm7|chr1 (159893211-159893557) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fbs (0.175346) |