Non-Coding RNA Search

rfbs3939b_n20.y1

Sequence:


               
               AAAAGACTGGGTTGATTCATTTTGGCTTTTGTCCTGGAAATATATGACTTGTGAAATTCG
AACATACTTGTGAAAATGCAAACAGTTACAATTATTAATAATCACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAGACTGGGTTGATTCATTTTGGCTTTTGTCCTGGAAATATATGACTTGTGAAATTCG
AACATACTTGTGAAAATGCAAACAGTTACAATTATTAATAATCACC

Aligned organism(s): 12 entry(ies)

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Aligned organism(s): 12 entry(ies)

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               2-106, gnl|bosTau2|chr17 (7464449-7464553)
               

               
               2-106, gnl|canFam2|chr13 (24996737-24996979)
               

               
               2-106, gnl|dasNov1|scaffold_79 (174342-174585)
               

               
               2-106, gnl|echTel1|scaffold_320640 (85532-85743)
               

               
               2-106, gnl|hg17|chr8 (124762054-124762268)
               

               
               2-106, gnl|loxAfr1|scaffold_16819 (48375-48135)
               

               
               2-106, gnl|mm7|chr15 (58406562-58406798)
               

               
               2-106, gnl|Mm7|chr15 (58406730-58406635)
               

               
               2-106, gnl|oryCun1|scaffold_135347 (11002-11244)
               

               
               2-106, gnl|panTro1|chr7_random (8325828-8325613)
               

               
               2-106, gnl|rheMac2|chr8 (126255096-126255310)
               

               
               2-106, gnl|rn3|chr7 (95105294-95105530)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-106, gnl|bosTau2|chr17 (7464449-7464553)
               

               
               2-106, gnl|canFam2|chr13 (24996737-24996979)
               

               
               2-106, gnl|dasNov1|scaffold_79 (174342-174585)
               

               
               2-106, gnl|echTel1|scaffold_320640 (85532-85743)
               

               
               2-106, gnl|hg17|chr8 (124762054-124762268)
               

               
               2-106, gnl|loxAfr1|scaffold_16819 (48375-48135)
               

               
               2-106, gnl|mm7|chr15 (58406562-58406798)
               

               
               2-106, gnl|Mm7|chr15 (58406730-58406635)
               

               
               2-106, gnl|oryCun1|scaffold_135347 (11002-11244)
               

               
               2-106, gnl|panTro1|chr7_random (8325828-8325613)
               

               
               2-106, gnl|rheMac2|chr8 (126255096-126255310)
               

               
               2-106, gnl|rn3|chr7 (95105294-95105530)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fbs (0.175346)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)

	2-106, gnl\|bosTau2\|chr17 (7464449-7464553)
	2-106, gnl\|canFam2\|chr13 (24996737-24996979)
	2-106, gnl\|dasNov1\|scaffold_79 (174342-174585)
	2-106, gnl\|echTel1\|scaffold_320640 (85532-85743)
	2-106, gnl\|hg17\|chr8 (124762054-124762268)
	2-106, gnl\|loxAfr1\|scaffold_16819 (48375-48135)
	2-106, gnl\|mm7\|chr15 (58406562-58406798)
	2-106, gnl\|Mm7\|chr15 (58406730-58406635)
	2-106, gnl\|oryCun1\|scaffold_135347 (11002-11244)
	2-106, gnl\|panTro1\|chr7_random (8325828-8325613)
	2-106, gnl\|rheMac2\|chr8 (126255096-126255310)
	2-106, gnl\|rn3\|chr7 (95105294-95105530)