Non-Coding RNA Search

rfcc35b_j3.y1

Sequence:


               
               AAGAAACCAGTCAGTAACTATATTGTTAATCCATGGTTAGGAAATGTTTAGTTGGAGATT
ACAAAATGAAACAACCATTGCAATACAGCCAAAGATTTGGGAAAAAAAAAAAAAAAAAAA
A

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAAACCAGTCAGTAACTATATTGTTAATCCATGGTTAGGAAATGTTTAGTTGGAGATT
ACAAAATGAAACAACCATTGCAATACAGCCAAAGATTTGGGAAAAAAAAAAAAAAAAAAA
A

Aligned organism(s): 14 entry(ies)

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Aligned organism(s): 14 entry(ies)

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               1-105, gnl|bosTau2|chr23 (12952164-12952268)
               

               
               1-105, gnl|canFam2|chr12 (14441870-14442097)
               

               
               1-105, gnl|dasNov1|scaffold_3896 (48040-47816)
               

               
               1-105, gnl|echTel1|scaffold_323377 (36358-36581)
               

               
               1-105, gnl|galGal2|chr3 (19442428-19442646)
               

               
               1-105, gnl|hg17|chr6 (42944121-42944345)
               

               
               1-105, gnl|Hg17|chr6 (42944168-42944272)
               

               
               1-105, gnl|mm7|chr17 (44928041-44927821)
               

               
               1-105, gnl|Mm7|chr17 (44927994-44927893)
               

               
               1-105, gnl|monDom2|scaffold_0 (198810656-198810406)
               

               
               1-105, gnl|panTro1|chr5 (43531396-43531620)
               

               
               1-105, gnl|rheMac2|chr4 (42752098-42752322)
               

               
               1-105, gnl|rn3|chr9 (9378672-9378886)
               

               
               1-105, gnl|xenTro1|scaffold_68 (1788646-1788427)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-105, gnl|bosTau2|chr23 (12952164-12952268)
               

               
               1-105, gnl|canFam2|chr12 (14441870-14442097)
               

               
               1-105, gnl|dasNov1|scaffold_3896 (48040-47816)
               

               
               1-105, gnl|echTel1|scaffold_323377 (36358-36581)
               

               
               1-105, gnl|galGal2|chr3 (19442428-19442646)
               

               
               1-105, gnl|hg17|chr6 (42944121-42944345)
               

               
               1-105, gnl|Hg17|chr6 (42944168-42944272)
               

               
               1-105, gnl|mm7|chr17 (44928041-44927821)
               

               
               1-105, gnl|Mm7|chr17 (44927994-44927893)
               

               
               1-105, gnl|monDom2|scaffold_0 (198810656-198810406)
               

               
               1-105, gnl|panTro1|chr5 (43531396-43531620)
               

               
               1-105, gnl|rheMac2|chr4 (42752098-42752322)
               

               
               1-105, gnl|rn3|chr9 (9378672-9378886)
               

               
               1-105, gnl|xenTro1|scaffold_68 (1788646-1788427)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               fcc (0.197785)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)

	1-105, gnl\|bosTau2\|chr23 (12952164-12952268)
	1-105, gnl\|canFam2\|chr12 (14441870-14442097)
	1-105, gnl\|dasNov1\|scaffold_3896 (48040-47816)
	1-105, gnl\|echTel1\|scaffold_323377 (36358-36581)
	1-105, gnl\|galGal2\|chr3 (19442428-19442646)
	1-105, gnl\|hg17\|chr6 (42944121-42944345)
	1-105, gnl\|Hg17\|chr6 (42944168-42944272)
	1-105, gnl\|mm7\|chr17 (44928041-44927821)
	1-105, gnl\|Mm7\|chr17 (44927994-44927893)
	1-105, gnl\|monDom2\|scaffold_0 (198810656-198810406)
	1-105, gnl\|panTro1\|chr5 (43531396-43531620)
	1-105, gnl\|rheMac2\|chr4 (42752098-42752322)
	1-105, gnl\|rn3\|chr9 (9378672-9378886)
	1-105, gnl\|xenTro1\|scaffold_68 (1788646-1788427)