Non-Coding RNA Search

rfce12c_l23.y1

Sequence:


               
               GATCCAAAAGCTCAGTCTCAAAGGAGCAGCAGATTTTTTATTATCAGAACCCCTAGAATT
TGGCATTTAGCACAGTTCTCTGGACCTGGCTAGGGACAGAAGATGAATAACCTTCTGTTC
TGTAACCAATTTTTCAGGGCAGTTGGGGGAGCAGGAAAGACTGATGCAGAGGTCCCACGG
GTCTGGGAAGCTCCGGTTACCCCAATGTCAGTGTCCATCGCGTGCCACATTCAAACTCTT
AACCCTTGGGTAGTTTCTTTCAACAATGAGAACTCTCTTGGTGGGGCAGAGGCTGTTCCA
TGGAGAGGAATGTTTACAGCAGTTTTGAAAAAGACAAAGCTAGTTGGGCAACAGAAAAAA
GACCAAAAGTCCACTCACTCTCTTCCACCTCTTTGGGGCACACTCGCCTCCAAGCATGAT
GGCCTGAAAGGGAGGGTCACCGCCAGTGAATGTGACGTCATCTCCAGTGTGTTGCCTCCC
CTTCTCCCAGGGCTCAAGCCATTCTCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATCCAAAAGCTCAGTCTCAAAGGAGCAGCAGATTTTTTATTATCAGAACCCCTAGAATT
TGGCATTTAGCACAGTTCTCTGGACCTGGCTAGGGACAGAAGATGAATAACCTTCTGTTC
TGTAACCAATTTTTCAGGGCAGTTGGGGGAGCAGGAAAGACTGATGCAGAGGTCCCACGG
GTCTGGGAAGCTCCGGTTACCCCAATGTCAGTGTCCATCGCGTGCCACATTCAAACTCTT
AACCCTTGGGTAGTTTCTTTCAACAATGAGAACTCTCTTGGTGGGGCAGAGGCTGTTCCA
TGGAGAGGAATGTTTACAGCAGTTTTGAAAAAGACAAAGCTAGTTGGGCAACAGAAAAAA
GACCAAAAGTCCACTCACTCTCTTCCACCTCTTTGGGGCACACTCGCCTCCAAGCATGAT
GGCCTGAAAGGGAGGGTCACCGCCAGTGAATGTGACGTCATCTCCAGTGTGTTGCCTCCC
CTTCTCCCAGGGCTCAAGCCATTCTCG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               28-501, gnl|bosTau2|chr23 (22664128-22664607)
               

               
               28-501, gnl|Hg17|chr6 (52977025-52976551)
               

               
               28-501, gnl|Mm7|chr9 (78212419-78213019)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               28-501, gnl|bosTau2|chr23 (22664128-22664607)
               

               
               28-501, gnl|Hg17|chr6 (52977025-52976551)
               

               
               28-501, gnl|Mm7|chr9 (78212419-78213019)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fce (0.271592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)

	28-501, gnl\|bosTau2\|chr23 (22664128-22664607)
	28-501, gnl\|Hg17\|chr6 (52977025-52976551)
	28-501, gnl\|Mm7\|chr9 (78212419-78213019)