Non-Coding RNA Search

rfce12c_p21.y1

Sequence:


               
               caccattcacaatctccgacggagtgtatggatccactttcttggtgggctacaggattt
cacgggtggcacgtaatcatcggatctactttcctagcagtgtgcttactacgacaacta
aaattccacttcacatccaaccaccacttcggcttggaagccgcagcctgatactgacac
ttcgtagatgtagttggactattcctttacgtatcaatctatggatgaggatcctAAAAA
AAAAAAAAAAAAAGAACTAGTCTCAGTTTTTTTTTTTTTTTTTTTGGTTCATAAGCAATT
TATTTTCCATTTTATTCTCCCAAGATGAAGCTCGCCACTCATCGAAATCCTGTGTCTTGG
ACCTCTAGGCCTCTGGAAGACTCTTAATACCACGACTGAGGAAATGGAAGCTGTGAGCAA
GGCAGGCCTGGGGATGCTGAAATTGGTTGAAGCTGTCATGGGCTACTGTGATGTTTTTAG
AGAAATCAAGCCCAAAAGAGACAAGGTATTACCCACCCTTGATACCTACACACTTCTGCC
AAGAGACCATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               caccattcacaatctccgacggagtgtatggatccactttcttggtgggctacaggattt
cacgggtggcacgtaatcatcggatctactttcctagcagtgtgcttactacgacaacta
aaattccacttcacatccaaccaccacttcggcttggaagccgcagcctgatactgacac
ttcgtagatgtagttggactattcctttacgtatcaatctatggatgaggatcctAAAAA
AAAAAAAAAAAAAGAACTAGTCTCAGTTTTTTTTTTTTTTTTTTTGGTTCATAAGCAATT
TATTTTCCATTTTATTCTCCCAAGATGAAGCTCGCCACTCATCGAAATCCTGTGTCTTGG
ACCTCTAGGCCTCTGGAAGACTCTTAATACCACGACTGAGGAAATGGAAGCTGTGAGCAA
GGCAGGCCTGGGGATGCTGAAATTGGTTGAAGCTGTCATGGGCTACTGTGATGTTTTTAG
AGAAATCAAGCCCAAAAGAGACAAGGTATTACCCACCCTTGATACCTACACACTTCTGCC
AAGAGACCATTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               284-552, gnl|bosTau2|chr17 (26867041-26867310)
               

               
               284-552, gnl|Hg17|chr12 (122919896-122920146)
               

               
               284-552, gnl|Mm7|chr5 (124050173-124050411)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               284-552, gnl|bosTau2|chr17 (26867041-26867310)
               

               
               284-552, gnl|Hg17|chr12 (122919896-122920146)
               

               
               284-552, gnl|Mm7|chr5 (124050173-124050411)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fce (0.271592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)

	284-552, gnl\|bosTau2\|chr17 (26867041-26867310)
	284-552, gnl\|Hg17\|chr12 (122919896-122920146)
	284-552, gnl\|Mm7\|chr5 (124050173-124050411)