Non-Coding RNA Search

rfce17c_a1.y1

Sequence:


               
               ATACCTCTCTTTTTTTCAATTTAATTTTTATTTTATATTGGAGTATGGTTGATTACAATG
TTGTGTTAGTTTCAGGTATTCAGCAAAGTGATTCAATTATTCATATACGAATATCCATTC
TTTTTCAGAGTCTTTCCCCATATAGGTTCTGGCAGAAGACTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATACCTCTCTTTTTTTCAATTTAATTTTTATTTTATATTGGAGTATGGTTGATTACAATG
TTGTGTTAGTTTCAGGTATTCAGCAAAGTGATTCAATTATTCATATACGAATATCCATTC
TTTTTCAGAGTCTTTCCCCATATAGGTTCTGGCAGAAGACTCA

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               11-161, gnl|bosTau2|chr28 (5630325-5630174)
               

               
               11-161, gnl|canFam2|chr4 (5484905-5484798)
               

               
               11-161, gnl|dasNov1|scaffold_4772 (95462-95277)
               

               
               11-161, gnl|echTel1|scaffold_305859 (5957-5771)
               

               
               11-161, gnl|hg17|chr1 (234197513-234197700)
               

               
               11-161, gnl|mm7|chr13 (11589472-11589268)
               

               
               11-161, gnl|panTro1|chr1 (218082079-218082266)
               

               
               11-161, gnl|rheMac2|chr1 (219341977-219341792)
               

               
               11-161, gnl|rn3|chr17 (69445470-69445672)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-161, gnl|bosTau2|chr28 (5630325-5630174)
               

               
               11-161, gnl|canFam2|chr4 (5484905-5484798)
               

               
               11-161, gnl|dasNov1|scaffold_4772 (95462-95277)
               

               
               11-161, gnl|echTel1|scaffold_305859 (5957-5771)
               

               
               11-161, gnl|hg17|chr1 (234197513-234197700)
               

               
               11-161, gnl|mm7|chr13 (11589472-11589268)
               

               
               11-161, gnl|panTro1|chr1 (218082079-218082266)
               

               
               11-161, gnl|rheMac2|chr1 (219341977-219341792)
               

               
               11-161, gnl|rn3|chr17 (69445470-69445672)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fce (0.271592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)

	11-161, gnl\|bosTau2\|chr28 (5630325-5630174)
	11-161, gnl\|canFam2\|chr4 (5484905-5484798)
	11-161, gnl\|dasNov1\|scaffold_4772 (95462-95277)
	11-161, gnl\|echTel1\|scaffold_305859 (5957-5771)
	11-161, gnl\|hg17\|chr1 (234197513-234197700)
	11-161, gnl\|mm7\|chr13 (11589472-11589268)
	11-161, gnl\|panTro1\|chr1 (218082079-218082266)
	11-161, gnl\|rheMac2\|chr1 (219341977-219341792)
	11-161, gnl\|rn3\|chr17 (69445470-69445672)