Non-Coding RNA Search

rfce19c_g9.y1

Sequence:


               
               CAGGACTCGCTGCTGCCAGGCGAGTCACCACCGCCTGTCCCGCAGTGGAGCATGCACAGC
TCGCAGCCTCTTTGCACGATTTCATCCATTTTAAATGCTCAACCCTCAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGACTCGCTGCTGCCAGGCGAGTCACCACCGCCTGTCCCGCAGTGGAGCATGCACAGC
TCGCAGCCTCTTTGCACGATTTCATCCATTTTAAATGCTCAACCCTCAAAAAAA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               1-107, gnl|bosTau2|chr22 (38049913-38050016)
               

               
               1-107, gnl|canFam2|chr20 (42601155-42600954)
               

               
               1-107, gnl|hg17|chr3 (49681442-49681642)
               

               
               1-107, gnl|Hg17|chr3 (49681474-49681577)
               

               
               1-107, gnl|loxAfr1|scaffold_37867 (1887-2087)
               

               
               1-107, gnl|mm7|chr9 (107827947-107827747)
               

               
               1-107, gnl|Mm7|chr9 (107827913-107827810)
               

               
               1-107, gnl|monDom2|scaffold_5 (75258833-75258617)
               

               
               1-107, gnl|panTro1|chr2 (51216318-51216512)
               

               
               1-107, gnl|rheMac2|chr2 (86752418-86752218)
               

               
               1-107, gnl|rn3|chr8 (113386100-113385900)
               

               
               1-107, gnl|xenTro1|scaffold_193 (366141-365913)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-107, gnl|bosTau2|chr22 (38049913-38050016)
               

               
               1-107, gnl|canFam2|chr20 (42601155-42600954)
               

               
               1-107, gnl|hg17|chr3 (49681442-49681642)
               

               
               1-107, gnl|Hg17|chr3 (49681474-49681577)
               

               
               1-107, gnl|loxAfr1|scaffold_37867 (1887-2087)
               

               
               1-107, gnl|mm7|chr9 (107827947-107827747)
               

               
               1-107, gnl|Mm7|chr9 (107827913-107827810)
               

               
               1-107, gnl|monDom2|scaffold_5 (75258833-75258617)
               

               
               1-107, gnl|panTro1|chr2 (51216318-51216512)
               

               
               1-107, gnl|rheMac2|chr2 (86752418-86752218)
               

               
               1-107, gnl|rn3|chr8 (113386100-113385900)
               

               
               1-107, gnl|xenTro1|scaffold_193 (366141-365913)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fce (0.271592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)

	1-107, gnl\|bosTau2\|chr22 (38049913-38050016)
	1-107, gnl\|canFam2\|chr20 (42601155-42600954)
	1-107, gnl\|hg17\|chr3 (49681442-49681642)
	1-107, gnl\|Hg17\|chr3 (49681474-49681577)
	1-107, gnl\|loxAfr1\|scaffold_37867 (1887-2087)
	1-107, gnl\|mm7\|chr9 (107827947-107827747)
	1-107, gnl\|Mm7\|chr9 (107827913-107827810)
	1-107, gnl\|monDom2\|scaffold_5 (75258833-75258617)
	1-107, gnl\|panTro1\|chr2 (51216318-51216512)
	1-107, gnl\|rheMac2\|chr2 (86752418-86752218)
	1-107, gnl\|rn3\|chr8 (113386100-113385900)
	1-107, gnl\|xenTro1\|scaffold_193 (366141-365913)