Non-Coding RNA Search

rfce20c_j23.y1

Sequence:


               
               CCCCGGGCTGCAGGCTAATTCCTCATTAATGAATTAAATAAAACTTTGACACATAATGCT
TTGATGGTTTTTGTGTATTTTATCCAATCTATTATCATCATTTCTCACCTAGTATCTATA
TTTTCTCTTTTGTTTGAGCAGCAACCAGTTTTTTTTGGAAGTTGGTAATGAACACATTTC
AATTTGGACATTCTTTTGGAGTCTCCTTACACTTCCATTCTTGGTACAACCCTCATCAAA
CCAACAACTGATTGCTAGTTTAGTAATTATTGACATATTTGACCCTAAAGTACATTTCTG
GAAATCGGAATTACACTCTGACCTGTGCCGATTCACAGTCATTTGGAAGATAGTTCTGTC
TTTTATTTACAAGAGAAATGCCACAGCATAACTGTCAGCTGGCTTGGACCTGGAGTTGTT
TTCCTGCAGTGGGGTTGAGTTGGCGCTACTCCACCCACATTTTCTCCCAGCTTCTCCTTA
TGACTGATGGCTCCCATTTGCAGGATGTCAGGCCTGGGTCTAAGAGACTGCCTGTAGCAA
AGTAAATTGGCCCACTTAGGGATCAAACCTGTGTACTTGGCTTCATCAGCCTGGTAATCT
TAGTGAAGGCATAAACCTGCCATTTTATCAGCTGATTGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCGGGCTGCAGGCTAATTCCTCATTAATGAATTAAATAAAACTTTGACACATAATGCT
TTGATGGTTTTTGTGTATTTTATCCAATCTATTATCATCATTTCTCACCTAGTATCTATA
TTTTCTCTTTTGTTTGAGCAGCAACCAGTTTTTTTTGGAAGTTGGTAATGAACACATTTC
AATTTGGACATTCTTTTGGAGTCTCCTTACACTTCCATTCTTGGTACAACCCTCATCAAA
CCAACAACTGATTGCTAGTTTAGTAATTATTGACATATTTGACCCTAAAGTACATTTCTG
GAAATCGGAATTACACTCTGACCTGTGCCGATTCACAGTCATTTGGAAGATAGTTCTGTC
TTTTATTTACAAGAGAAATGCCACAGCATAACTGTCAGCTGGCTTGGACCTGGAGTTGTT
TTCCTGCAGTGGGGTTGAGTTGGCGCTACTCCACCCACATTTTCTCCCAGCTTCTCCTTA
TGACTGATGGCTCCCATTTGCAGGATGTCAGGCCTGGGTCTAAGAGACTGCCTGTAGCAA
AGTAAATTGGCCCACTTAGGGATCAAACCTGTGTACTTGGCTTCATCAGCCTGGTAATCT
TAGTGAAGGCATAAACCTGCCATTTTATCAGCTGATTGAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               14-640, gnl|bosTau2|chr1 (77097883-77097255)
               

               
               14-640, gnl|Hg17|chr3 (148241009-148240247)
               

               
               14-640, gnl|Mm7|chr9 (91339667-91340270)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-640, gnl|bosTau2|chr1 (77097883-77097255)
               

               
               14-640, gnl|Hg17|chr3 (148241009-148240247)
               

               
               14-640, gnl|Mm7|chr9 (91339667-91340270)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fce (0.271592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)

	14-640, gnl\|bosTau2\|chr1 (77097883-77097255)
	14-640, gnl\|Hg17\|chr3 (148241009-148240247)
	14-640, gnl\|Mm7\|chr9 (91339667-91340270)