Non-Coding RNA Search

rfce34c_a16.y1

Sequence:


               
               AGCATAAAAGTAATGTTTGGGGGTTGTAAAAAAATGATAGTCAGAAACTACTAAAAAGTA
TAAAGATGACAATGGAAATTATTCAACTCCTACCATCCAGAAATAGCCACACCATTAATA
TTCTGGTGTGTGTACTTCCGTCCTTTTTCCTCTGCATATAAAAATACGTACATATTTTTT
TAAACCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCATAAAAGTAATGTTTGGGGGTTGTAAAAAAATGATAGTCAGAAACTACTAAAAAGTA
TAAAGATGACAATGGAAATTATTCAACTCCTACCATCCAGAAATAGCCACACCATTAATA
TTCTGGTGTGTGTACTTCCGTCCTTTTTCCTCTGCATATAAAAATACGTACATATTTTTT
TAAACCAA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               6-187, gnl|bosTau2|chr5 (45293793-45293970)
               

               
               6-187, gnl|canFam2|chr10 (30784039-30783840)
               

               
               6-187, gnl|dasNov1|scaffold_4073 (130770-130964)
               

               
               6-187, gnl|echTel1|scaffold_247821 (4173-3973)
               

               
               6-187, gnl|hg17|chr22 (35472616-35472817)
               

               
               6-187, gnl|Hg17|chr22 (35472817-35472671)
               

               
               6-187, gnl|loxAfr1|scaffold_75947 (6203-6380)
               

               
               6-187, gnl|mm7|chr15 (78237064-78237256)
               

               
               6-187, gnl|Mm7|chr15 (78237260-78237116)
               

               
               6-187, gnl|panTro1|chr23 (35638236-35638433)
               

               
               6-187, gnl|rheMac2|chr10 (80655876-80656077)
               

               
               6-187, gnl|rn3|chr7 (116109208-116109380)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-187, gnl|bosTau2|chr5 (45293793-45293970)
               

               
               6-187, gnl|canFam2|chr10 (30784039-30783840)
               

               
               6-187, gnl|dasNov1|scaffold_4073 (130770-130964)
               

               
               6-187, gnl|echTel1|scaffold_247821 (4173-3973)
               

               
               6-187, gnl|hg17|chr22 (35472616-35472817)
               

               
               6-187, gnl|Hg17|chr22 (35472817-35472671)
               

               
               6-187, gnl|loxAfr1|scaffold_75947 (6203-6380)
               

               
               6-187, gnl|mm7|chr15 (78237064-78237256)
               

               
               6-187, gnl|Mm7|chr15 (78237260-78237116)
               

               
               6-187, gnl|panTro1|chr23 (35638236-35638433)
               

               
               6-187, gnl|rheMac2|chr10 (80655876-80656077)
               

               
               6-187, gnl|rn3|chr7 (116109208-116109380)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fce (0.271592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)

	6-187, gnl\|bosTau2\|chr5 (45293793-45293970)
	6-187, gnl\|canFam2\|chr10 (30784039-30783840)
	6-187, gnl\|dasNov1\|scaffold_4073 (130770-130964)
	6-187, gnl\|echTel1\|scaffold_247821 (4173-3973)
	6-187, gnl\|hg17\|chr22 (35472616-35472817)
	6-187, gnl\|Hg17\|chr22 (35472817-35472671)
	6-187, gnl\|loxAfr1\|scaffold_75947 (6203-6380)
	6-187, gnl\|mm7\|chr15 (78237064-78237256)
	6-187, gnl\|Mm7\|chr15 (78237260-78237116)
	6-187, gnl\|panTro1\|chr23 (35638236-35638433)
	6-187, gnl\|rheMac2\|chr10 (80655876-80656077)
	6-187, gnl\|rn3\|chr7 (116109208-116109380)