Non-Coding RNA Search

rfce34c_l4.y1

Sequence:


               
               AGTCAAAACAGACAATAGGGGAGTTCAACATGTGATGGAACCACAAAAGGTCACACAAGC
CAAACATGGCATGACAGAGTGCAAAATTCATAGTTCTTCCCCCACCCCCAACATGATACT
GTTTTTCACAGTGATTTAATTTTGTAGCCTGACATTTATGGATAACTCTGTCCTTCCATT
TGCTCACATCTCCCTTCATCCCTCTTTTCTAAAAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTCAAAACAGACAATAGGGGAGTTCAACATGTGATGGAACCACAAAAGGTCACACAAGC
CAAACATGGCATGACAGAGTGCAAAATTCATAGTTCTTCCCCCACCCCCAACATGATACT
GTTTTTCACAGTGATTTAATTTTGTAGCCTGACATTTATGGATAACTCTGTCCTTCCATT
TGCTCACATCTCCCTTCATCCCTCTTTTCTAAAAATA

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               3-217, gnl|bosTau2|chr10 (63800032-63800246)
               

               
               3-217, gnl|canFam2|chr8 (55421598-55422208)
               

               
               3-217, gnl|dasNov1|scaffold_283 (179627-180238)
               

               
               3-217, gnl|echTel1|scaffold_311411 (334599-335207)
               

               
               3-217, gnl|galGal2|chr5 (37287118-37287771)
               

               
               3-217, gnl|hg17|chr14 (79398733-79399333)
               

               
               3-217, gnl|Hg17|chr14 (79399140-79399354)
               

               
               3-217, gnl|mm7|chr12 (87813320-87813913)
               

               
               3-217, gnl|Mm7|chr12 (87813733-87813938)
               

               
               3-217, gnl|monDom2|scaffold_8 (52821747-52821106)
               

               
               3-217, gnl|oryCun1|scaffold_208883 (10353-9751)
               

               
               3-217, gnl|panTro1|chr15 (79480591-79481191)
               

               
               3-217, gnl|rheMac2|chr7 (143073545-143074150)
               

               
               3-217, gnl|rn3|chr6 (113909132-113909724)
               

               
               3-217, gnl|xenTro1|scaffold_3716 (15862-15246)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-217, gnl|bosTau2|chr10 (63800032-63800246)
               

               
               3-217, gnl|canFam2|chr8 (55421598-55422208)
               

               
               3-217, gnl|dasNov1|scaffold_283 (179627-180238)
               

               
               3-217, gnl|echTel1|scaffold_311411 (334599-335207)
               

               
               3-217, gnl|galGal2|chr5 (37287118-37287771)
               

               
               3-217, gnl|hg17|chr14 (79398733-79399333)
               

               
               3-217, gnl|Hg17|chr14 (79399140-79399354)
               

               
               3-217, gnl|mm7|chr12 (87813320-87813913)
               

               
               3-217, gnl|Mm7|chr12 (87813733-87813938)
               

               
               3-217, gnl|monDom2|scaffold_8 (52821747-52821106)
               

               
               3-217, gnl|oryCun1|scaffold_208883 (10353-9751)
               

               
               3-217, gnl|panTro1|chr15 (79480591-79481191)
               

               
               3-217, gnl|rheMac2|chr7 (143073545-143074150)
               

               
               3-217, gnl|rn3|chr6 (113909132-113909724)
               

               
               3-217, gnl|xenTro1|scaffold_3716 (15862-15246)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fce (0.271592)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)

	3-217, gnl\|bosTau2\|chr10 (63800032-63800246)
	3-217, gnl\|canFam2\|chr8 (55421598-55422208)
	3-217, gnl\|dasNov1\|scaffold_283 (179627-180238)
	3-217, gnl\|echTel1\|scaffold_311411 (334599-335207)
	3-217, gnl\|galGal2\|chr5 (37287118-37287771)
	3-217, gnl\|hg17\|chr14 (79398733-79399333)
	3-217, gnl\|Hg17\|chr14 (79399140-79399354)
	3-217, gnl\|mm7\|chr12 (87813320-87813913)
	3-217, gnl\|Mm7\|chr12 (87813733-87813938)
	3-217, gnl\|monDom2\|scaffold_8 (52821747-52821106)
	3-217, gnl\|oryCun1\|scaffold_208883 (10353-9751)
	3-217, gnl\|panTro1\|chr15 (79480591-79481191)
	3-217, gnl\|rheMac2\|chr7 (143073545-143074150)
	3-217, gnl\|rn3\|chr6 (113909132-113909724)
	3-217, gnl\|xenTro1\|scaffold_3716 (15862-15246)