Non-Coding RNA Search

rfhi4016b_h17.y1

Sequence:


               
               GAAGTCCCACCAGGCCTGGATTTTCAGCACAGTGATTTCACCACATGCCTATTCATATGT
GAGGCTGGACATTTAGGGCAGTTAAAATATGCTTCTAATTACATTAGAACTTTAATTCTG
CTTCCCATATAAACACAAAATATTTTGCACCCTTTGAATATACACTGATTTTTCTGTAAA
TGCAATTACTCTATCAGTCTACGAAAGACTGCACTTTGTTTGCCATTTTGGAAAATAAGG
ACAAGGAAGCTAGCTCCACTCAGGGCATCTGAGTCAGCAATCAATACATCAGCACCTGTC
AAATGTATGACTGTCACAGGCCCAGTAATTCCAAATGTGTATATGAATATTTTTATTTAG
CTCTTACTCCAAAATGTCAAAAATAAAAAGTGTCAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGTCCCACCAGGCCTGGATTTTCAGCACAGTGATTTCACCACATGCCTATTCATATGT
GAGGCTGGACATTTAGGGCAGTTAAAATATGCTTCTAATTACATTAGAACTTTAATTCTG
CTTCCCATATAAACACAAAATATTTTGCACCCTTTGAATATACACTGATTTTTCTGTAAA
TGCAATTACTCTATCAGTCTACGAAAGACTGCACTTTGTTTGCCATTTTGGAAAATAAGG
ACAAGGAAGCTAGCTCCACTCAGGGCATCTGAGTCAGCAATCAATACATCAGCACCTGTC
AAATGTATGACTGTCACAGGCCCAGTAATTCCAAATGTGTATATGAATATTTTTATTTAG
CTCTTACTCCAAAATGTCAAAAATAAAAAGTGTCAGT

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

Help | Less info


               
               2-387, gnl|bosTau2|chr2 (38726930-38726547)
               

               
               2-387, gnl|canFam2|chr19 (40583469-40583904)
               

               
               2-387, gnl|hg17|chr2 (135314305-135314712)
               

               
               2-387, gnl|Hg17|chr2 (135314337-135314684)
               

               
               2-387, gnl|mm7|chr1 (127559577-127559975)
               

               
               2-387, gnl|panTro1|chr13 (24306063-24306470)
               

               
               2-387, gnl|rheMac2|chr13 (117445824-117445419)
               

               
               2-387, gnl|rn3|chr13 (40344022-40344386)

Aligned organism(s): 8 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-387, gnl|bosTau2|chr2 (38726930-38726547)
               

               
               2-387, gnl|canFam2|chr19 (40583469-40583904)
               

               
               2-387, gnl|hg17|chr2 (135314305-135314712)
               

               
               2-387, gnl|Hg17|chr2 (135314337-135314684)
               

               
               2-387, gnl|mm7|chr1 (127559577-127559975)
               

               
               2-387, gnl|panTro1|chr13 (24306063-24306470)
               

               
               2-387, gnl|rheMac2|chr13 (117445824-117445419)
               

               
               2-387, gnl|rn3|chr13 (40344022-40344386)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fhi (0.169578)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)

	2-387, gnl\|bosTau2\|chr2 (38726930-38726547)
	2-387, gnl\|canFam2\|chr19 (40583469-40583904)
	2-387, gnl\|hg17\|chr2 (135314305-135314712)
	2-387, gnl\|Hg17\|chr2 (135314337-135314684)
	2-387, gnl\|mm7\|chr1 (127559577-127559975)
	2-387, gnl\|panTro1\|chr13 (24306063-24306470)
	2-387, gnl\|rheMac2\|chr13 (117445824-117445419)
	2-387, gnl\|rn3\|chr13 (40344022-40344386)