Non-Coding RNA Search

rfhi4020b_o21.y1

Sequence:


               
               CTGGAATCTCATCCTCACCATCACCACTAAATCCTATCTACTAGGCAACATATATACTTT
ACCCATTTCTTTGGACACTCAAAAAACTCATTTGTGCTCTATTTCAAATAATAAACAGAA
AATTTTAGTGATAATTTAGAACTATTTTTACATGATTAGCATTTAATTTTTAAGTAAAAA
TGGTCATTTTAATTTATTAAAGTCATTTGTCATTTTATATTAAAATGATACTGTAGGTAT
TTCTTCTACCCAATGTCAGATTACTTGTACATATATAATAAAACTATTTGCATTAAACGA
TGTCTCTTTTTTATTAAAATGTCACATTTGTATATTAAACCTACGGCTTTTTTCCTTCTC
CCTTCACAGAATAGTTATAATCATCAATAATGGTTTTTGTATTAACTACTTCTGTTTTAC
TGTCTTTGGGGCCCCAAAGTACTATCTAAATATATTAATTGTTTTAGAAAAAAAAAAAAA
A

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGAATCTCATCCTCACCATCACCACTAAATCCTATCTACTAGGCAACATATATACTTT
ACCCATTTCTTTGGACACTCAAAAAACTCATTTGTGCTCTATTTCAAATAATAAACAGAA
AATTTTAGTGATAATTTAGAACTATTTTTACATGATTAGCATTTAATTTTTAAGTAAAAA
TGGTCATTTTAATTTATTAAAGTCATTTGTCATTTTATATTAAAATGATACTGTAGGTAT
TTCTTCTACCCAATGTCAGATTACTTGTACATATATAATAAAACTATTTGCATTAAACGA
TGTCTCTTTTTTATTAAAATGTCACATTTGTATATTAAACCTACGGCTTTTTTCCTTCTC
CCTTCACAGAATAGTTATAATCATCAATAATGGTTTTTGTATTAACTACTTCTGTTTTAC
TGTCTTTGGGGCCCCAAAGTACTATCTAAATATATTAATTGTTTTAGAAAAAAAAAAAAA
A

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-466, gnl|bosTau2|chr6 (45410839-45411308)
               

               
               4-466, gnl|Hg17|chr4 (66025336-66024865)
               

               
               4-466, gnl|Mm7|chr5 (84001447-84000969)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-466, gnl|bosTau2|chr6 (45410839-45411308)
               

               
               4-466, gnl|Hg17|chr4 (66025336-66024865)
               

               
               4-466, gnl|Mm7|chr5 (84001447-84000969)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fhi (0.169578)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)

	4-466, gnl\|bosTau2\|chr6 (45410839-45411308)
	4-466, gnl\|Hg17\|chr4 (66025336-66024865)
	4-466, gnl\|Mm7\|chr5 (84001447-84000969)