Non-Coding RNA Search

rfhi4022b_e22.y1

Sequence:


               
               CTGCAGGAATTCGAGAGGCTCGGATCCCTCGTTCACGAGGGGGAGCTCGCCTCCCTTCGA
CCTGTTTATTTTCGTATTTAAGACTATTTATTAACGGTCAGACCAATGTACCTTCAGCTG
TGGCATCGAGCAGGCCTCAGAGAAAATGCTGTATAAATAGACAAAATAAAAAGGGTTTTG
ACTTTGCAATAAAAGGAGACATTTGGTTCTGaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaa

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGGAATTCGAGAGGCTCGGATCCCTCGTTCACGAGGGGGAGCTCGCCTCCCTTCGA
CCTGTTTATTTTCGTATTTAAGACTATTTATTAACGGTCAGACCAATGTACCTTCAGCTG
TGGCATCGAGCAGGCCTCAGAGAAAATGCTGTATAAATAGACAAAATAAAAAGGGTTTTG
ACTTTGCAATAAAAGGAGACATTTGGTTCTGaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaa

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               19-211, gnl|bosTau2|chr13 (40326864-40327055)
               

               
               19-211, gnl|canFam2|chr24 (45183990-45184205)
               

               
               19-211, gnl|galGal2|chr20 (11243839-11243660)
               

               
               19-211, gnl|hg17|chr20 (55177208-55177427)
               

               
               19-211, gnl|Hg17|chr20 (55177409-55177218)
               

               
               19-211, gnl|mm7|chr2 (172612401-172612603)
               

               
               19-211, gnl|Mm7|chr2 (172612591-172612411)
               

               
               19-211, gnl|monDom2|scaffold_1 (170718751-170718971)
               

               
               19-211, gnl|panTro1|chr21 (58100808-58101028)
               

               
               19-211, gnl|rheMac2|chr10 (7369836-7369619)
               

               
               19-211, gnl|rn3|chr3 (163627690-163627894)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-211, gnl|bosTau2|chr13 (40326864-40327055)
               

               
               19-211, gnl|canFam2|chr24 (45183990-45184205)
               

               
               19-211, gnl|galGal2|chr20 (11243839-11243660)
               

               
               19-211, gnl|hg17|chr20 (55177208-55177427)
               

               
               19-211, gnl|Hg17|chr20 (55177409-55177218)
               

               
               19-211, gnl|mm7|chr2 (172612401-172612603)
               

               
               19-211, gnl|Mm7|chr2 (172612591-172612411)
               

               
               19-211, gnl|monDom2|scaffold_1 (170718751-170718971)
               

               
               19-211, gnl|panTro1|chr21 (58100808-58101028)
               

               
               19-211, gnl|rheMac2|chr10 (7369836-7369619)
               

               
               19-211, gnl|rn3|chr3 (163627690-163627894)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fhi (0.169578)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)

	19-211, gnl\|bosTau2\|chr13 (40326864-40327055)
	19-211, gnl\|canFam2\|chr24 (45183990-45184205)
	19-211, gnl\|galGal2\|chr20 (11243839-11243660)
	19-211, gnl\|hg17\|chr20 (55177208-55177427)
	19-211, gnl\|Hg17\|chr20 (55177409-55177218)
	19-211, gnl\|mm7\|chr2 (172612401-172612603)
	19-211, gnl\|Mm7\|chr2 (172612591-172612411)
	19-211, gnl\|monDom2\|scaffold_1 (170718751-170718971)
	19-211, gnl\|panTro1\|chr21 (58100808-58101028)
	19-211, gnl\|rheMac2\|chr10 (7369836-7369619)
	19-211, gnl\|rn3\|chr3 (163627690-163627894)